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CTVgp06 27-kDa protein [ Citrus tristeza virus ]

Gene ID: 1493987, updated on 18-Aug-2023

Summary

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Gene symbol
CTVgp06
Gene description
27-kDa protein
Locus tag
CTVgp06
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Citrus tristeza virus
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; Closterovirus
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Genomic context

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Sequence:
NC_001661.1 (15339..16061)

NC_001661.1Genomic Context describing neighboring genes Neighboring gene 6-kDa protein Neighboring gene 65-kDa protein Neighboring gene 61-kDa protein Neighboring gene 25-kDa coat protein Neighboring gene 18-kDa protein Neighboring gene 13-kDa protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001661.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CPm gene diversity in field isolates of Citrus tristeza virus from Colombia. Oliveros-Garay OA, et al. Arch Virol, 2009. PMID 19882104
  2. Minor Coat and Heat Shock Proteins Are Involved in the Binding of Citrus Tristeza Virus to the Foregut of Its Aphid Vector, Toxoptera citricida. Killiny N, et al. Appl Environ Microbiol, 2016 Nov 1. PMID 27520823, Free PMC Article
  3. Heterologous minor coat proteins of Citrus tristeza virus strains affect encapsidation, but the coexpression of HSP70h and p61 restores encapsidation to wild-type levels. Tatineni S, et al. Virology, 2010 Jul 5. PMID 20399478
  4. Nucleotide sequence and organization of eight 3' open reading frames of the citrus tristeza closterovirus genome. Pappu HR, et al. Virology, 1994 Feb 15. PMID 8116253
  5. Transcriptional strategy of closteroviruses: mapping the 5' termini of the citrus tristeza virus subgenomic RNAs. Karasev AV, et al. J Virol, 1997 Aug. PMID 9223524, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. localized the CTV retention site as the cibarium of the aphid foregut and demonstrated that the nature of these interactions is protein-carbohydrate binding; the viral proteins, including the minor coat protein, p27 and 2 heat shock proteins (p61 and p65), bind to sugar moieties on the surface of the foregut
    Title: Minor Coat and Heat Shock Proteins Are Involved in the Binding of Citrus Tristeza Virus to the Foregut of Its Aphid Vector, Toxoptera citricida.
  2. HSP70h and p61 enhance virion formation, restrict minor coat protein (CPm) encapsidation to the 5' 630 nucleotides of the genomic RNA and facilitate encapsidation by heterologous CPms.
    Title: Heterologous minor coat proteins of Citrus tristeza virus strains affect encapsidation, but the coexpression of HSP70h and p61 restores encapsidation to wild-type levels.
  3. The nucleotide sequence diversity of the CPm gene from 28 field isolates of Citrus tristeza virus (CTV) from Colombia was assessed by SSCP and sequence analyses.
    Title: CPm gene diversity in field isolates of Citrus tristeza virus from Colombia.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
27-kDa protein
NP_042866.1
  • This is a diverged copy of the CTV coat protein; label: p27

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001661.1 Reference assembly

    Range
    15339..16061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_042866.1 27-kDa protein [Citrus tristeza virus]

    See identical proteins and their annotated locations for NP_042866.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A166EI23, A0A4P8D3C2, A0A8F7GP26, B5THD5, Q66241, Q7T707
    Conserved Domains (1) summary
    pfam01785
    Location:50 → 239
    Closter_coat; Closterovirus coat protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
2113437G.1

Gene LinkOut

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