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Jpt1 Jupiter microtubule associated homolog 1 [ Mus musculus (house mouse) ]

Gene ID: 15374, updated on 23-Jun-2021

Summary

Official Symbol
Jpt1provided by MGI
Official Full Name
Jupiter microtubule associated homolog 1provided by MGI
Primary source
MGI:MGI:1096361
See related
Ensembl:ENSMUSG00000020737
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hn; Hn1
Expression
Ubiquitous expression in whole brain E14.5 (RPKM 391.8), CNS E18 (RPKM 387.3) and 26 other tissues See more
Orthologs
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Genomic context

See Jpt1 in Genome Data Viewer
Location:
11 E2; 11 80.84 cM
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (115388171..115405219, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115497345..115514393, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (115358667..115375684, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 7 Neighboring gene ribosomal protein L39 pseudogene Neighboring gene 5',3'-nucleotidase, cytosolic Neighboring gene small ubiquitin-like modifier 2 Neighboring gene nucleoporin 85

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear membrane ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
jupiter microtubule associated homolog 1
Names
hematological and neurological expressed 1 protein
hematological and neurological expressed sequence 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008258.2NP_032284.1  jupiter microtubule associated homolog 1

    See identical proteins and their annotated locations for NP_032284.1

    Status: VALIDATED

    Source sequence(s)
    AL645470
    Consensus CDS
    CCDS25638.1
    UniProtKB/Swiss-Prot
    P97825
    Related
    ENSMUSP00000021083.7, ENSMUST00000021083.7
    Conserved Domains (1) summary
    pfam17054
    Location:158
    JUPITER; Microtubule-Associated protein Jupiter

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    115388171..115405219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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