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Hrh2 histamine receptor H2 [ Mus musculus (house mouse) ]

Gene ID: 15466, updated on 21-Apr-2024

Summary

Official Symbol
Hrh2provided by MGI
Official Full Name
histamine receptor H2provided by MGI
Primary source
MGI:MGI:108482
See related
Ensembl:ENSMUSG00000034987 AllianceGenome:MGI:108482
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H2R; HH2R
Summary
Predicted to enable G protein-coupled amine receptor activity; heterocyclic compound binding activity; and neurotransmitter receptor activity. Acts upstream of or within several processes, including gastric acid secretion; learning or memory; and toxin transport. Predicted to be located in membrane. Predicted to be active in dendrite. Predicted to be integral component of plasma membrane. Is expressed in brain; early conceptus; stomach; and uterus. Orthologous to human HRH2 (histamine receptor H2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in frontal lobe adult (RPKM 1.9), stomach adult (RPKM 1.8) and 18 other tissues See more
Orthologs
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Genomic context

Location:
13 B1; 13 28.4 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (54345990..54390201)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (54191970..54236182)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein, large, P0 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E8891 Neighboring gene predicted gene, 34640 Neighboring gene STARR-seq mESC enhancer starr_34580 Neighboring gene predicted gene 16578 Neighboring gene predicted gene, 40955 Neighboring gene predicted gene, 48622 Neighboring gene STARR-positive B cell enhancer ABC_E5398 Neighboring gene complexin 2 Neighboring gene STARR-positive B cell enhancer ABC_E11782 Neighboring gene STARR-positive B cell enhancer ABC_E7240

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables G protein-coupled serotonin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables heterocyclic compound binding ISO
Inferred from Sequence Orthology
more info
 
enables histamine receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables neurotransmitter receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in chemical synaptic transmission IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within digestive tract development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within epithelial cell morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within gastric acid secretion IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within gastrin-induced gastric acid secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within gland development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within histamine-induced gastric acid secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within memory IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of arachidonic acid secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of vasoconstriction IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of synaptic plasticity IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within visual learning IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in dendrite IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
histamine H2 receptor
Names
gastric receptor I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010973.3NP_001010973.1  histamine H2 receptor isoform 1

    See identical proteins and their annotated locations for NP_001010973.1

    Status: VALIDATED

    Source sequence(s)
    AC163343, AC164086
    Consensus CDS
    CCDS26526.1
    UniProtKB/Swiss-Prot
    P97292, Q9D282
    UniProtKB/TrEMBL
    Q9QX37
    Related
    ENSMUSP00000038170.4, ENSMUST00000038101.4
    Conserved Domains (1) summary
    cd15051
    Location:19298
    7tmA_Histamine_H2R; histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
  2. NM_001413010.1NP_001399939.1  histamine H2 receptor isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC163343, AC164086
    UniProtKB/TrEMBL
    A0A1B0GSX9
    Related
    ENSMUSP00000148117.2, ENSMUST00000209846.2

RNA

  1. NR_153432.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC163343, AC164086
    Related
    ENSMUST00000211742.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    54345990..54390201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036157857.1XP_036013750.1  histamine H2 receptor isoform X2

    Conserved Domains (2) summary
    cd14964
    Location:4070
    7tm_GPCRs; TM helix 6 [structural motif]
    cl28897
    Location:2112
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
  2. XM_036157856.1XP_036013749.1  histamine H2 receptor isoform X1

    UniProtKB/TrEMBL
    A0A1B0GSX9, Q9QX37
    Conserved Domains (1) summary
    cd15051
    Location:19298
    7tmA_Histamine_H2R; histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_008286.2: Suppressed sequence

    Description
    NM_008286.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.