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Ier2 immediate early response 2 [ Mus musculus (house mouse) ]

Gene ID: 15936, updated on 23-Jun-2021

Summary

Official Symbol
Ier2provided by MGI
Official Full Name
immediate early response 2provided by MGI
Primary source
MGI:MGI:104815
See related
Ensembl:ENSMUSG00000053560
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
pi; Ch1; Pip92; AI317238
Orthologs
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Genomic context

See Ier2 in Genome Data Viewer
Location:
8 C3; 8 41.02 cM
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (85387960..85389481, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (84661331..84662852, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (87185230..87186751, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, P/Q type, alpha 1A subunit Neighboring gene predicted gene, 39212 Neighboring gene predicted gene, 39211 Neighboring gene nucleus accumbens associated 1, BEN and BTB (POZ) domain containing Neighboring gene tRNA methyltransferase 1 Neighboring gene lymphoblastomic leukemia 1 Neighboring gene nuclear factor I/X

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in cell motility ISO
Inferred from Sequence Orthology
more info
 
involved_in neuron differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in response to fibroblast growth factor ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
immediate early response gene 2 protein
Names
CHX1
T-lymphocyte-activated protein
cycloheximide-induced gene protein
growth factor-inducible immediate early protein
proline-rich-induced protein 92

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010499.4NP_034629.3  immediate early response gene 2 protein

    See identical proteins and their annotated locations for NP_034629.3

    Status: VALIDATED

    Source sequence(s)
    AK144601, BP770574, BU604538
    Consensus CDS
    CCDS22474.1
    UniProtKB/Swiss-Prot
    P17950
    Related
    ENSMUSP00000060275.5, ENSMUST00000060427.6
    Conserved Domains (1) summary
    pfam05760
    Location:1100
    IER; Immediate early response protein (IER)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    85387960..85389481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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