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Krt86 keratin 86 [ Mus musculus (house mouse) ]

Gene ID: 16679, updated on 23-Jun-2021

Summary

Official Symbol
Krt86provided by MGI
Official Full Name
keratin 86provided by MGI
Primary source
MGI:MGI:109362
See related
Ensembl:ENSMUSG00000067614
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Khb4; MHb4; Krt2-1; Krt2-10; Krt2-11; AI325212; 5430421N21Rik
Expression
Low expression observed in reference dataset See more
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Genomic context

See Krt86 in Genome Data Viewer
Location:
15 F2; 15 56.9 cM
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101371359..101377864)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101473478..101479983)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101303909..101310414)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene keratin 88 Neighboring gene keratin 81 Neighboring gene keratin 83 Neighboring gene type II keratin Kb32P

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
keratin, type II cuticular Hb6
Names
K86
keratin complex 2, basic, gene 10
type II hair keratin Hb6
type-II keratin Kb26

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010667.2NP_034797.1  keratin, type II cuticular Hb6

    See identical proteins and their annotated locations for NP_034797.1

    Status: PROVISIONAL

    Source sequence(s)
    AK161149
    Consensus CDS
    CCDS37218.1
    UniProtKB/Swiss-Prot
    P97861
    UniProtKB/TrEMBL
    B2RTB6
    Related
    ENSMUSP00000085365.4, ENSMUST00000088049.5
    Conserved Domains (3) summary
    pfam00038
    Location:105416
    Filament; Intermediate filament protein
    pfam16208
    Location:4102
    Keratin_2_head; Keratin type II head
    cl23720
    Location:315383
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    101371359..101377864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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