Format

Send to:

Choose Destination

Krt84 keratin 84 [ Mus musculus (house mouse) ]

Gene ID: 16680, updated on 23-Jun-2021

Summary

Official Symbol
Krt84provided by MGI
Official Full Name
keratin 84provided by MGI
Primary source
MGI:MGI:96700
See related
Ensembl:ENSMUSG00000044294
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
HRb-; HRb-1; Krt2-; Krt2-1; Krt2-3; Krt2-16; AV235125
Expression
Low expression observed in reference dataset See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Krt84 in Genome Data Viewer
Location:
15 F2; 15 56.9 cM
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101433461..101441255, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101525026..101532820, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101355457..101363251, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene type II keratin Kb32P Neighboring gene predicted gene, 53914 Neighboring gene keratin 85 Neighboring gene keratin 82 Neighboring gene keratin 90

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC140837

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of skin epidermis IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of keratinocyte differentiation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 
located_in intermediate filament cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 
located_in keratin filament ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
keratin, type II cuticular Hb4
Names
65 kDa type II keratin
K84
keratin complex 2, basic, gene 16
keratin complex 2, gene 16
type II hair keratin Hb4
type-II keratin Kb24

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008474.2NP_032500.2  keratin, type II cuticular Hb4

    See identical proteins and their annotated locations for NP_032500.2

    Status: VALIDATED

    Source sequence(s)
    AA738772, BC114971, BY779643, CF173770, CJ052880
    Consensus CDS
    CCDS27853.1
    UniProtKB/Swiss-Prot
    Q99M73
    Related
    ENSMUSP00000023720.8, ENSMUST00000023720.8
    Conserved Domains (4) summary
    pfam00038
    Location:173483
    Filament; Intermediate filament protein
    pfam16208
    Location:16169
    Keratin_2_head; Keratin type II head
    cl12013
    Location:217372
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    cl23720
    Location:390452
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    101433461..101441255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center