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Mbl2 mannose-binding lectin (protein C) 2 [ Mus musculus (house mouse) ]

Gene ID: 17195, updated on 11-Apr-2024

Summary

Official Symbol
Mbl2provided by MGI
Official Full Name
mannose-binding lectin (protein C) 2provided by MGI
Primary source
MGI:MGI:96924
See related
Ensembl:ENSMUSG00000024863 AllianceGenome:MGI:96924
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MBL; L-MBP; MBL-C; MBP-C; RARF/P28A
Summary
Predicted to enable several functions, including calcium-dependent protein binding activity; identical protein binding activity; and mannose binding activity. Acts upstream of or within defense response to other organism and positive regulation of phagocytosis. Located in extracellular space. Is expressed in embryo. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); bacterial infectious disease (multiple); fungal infectious disease (multiple); liver disease (multiple); and lung disease (multiple). Orthologous to human MBL2 (mannose binding lectin 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver adult (RPKM 158.5), liver E18 (RPKM 28.1) and 1 other tissue See more
Orthologs
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Genomic context

See Mbl2 in Genome Data Viewer
Location:
19 C1; 19 25.14 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (30210306..30217087)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (30232906..30239687)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-like, containing PHD and RING finger domains 2 Neighboring gene glycine decarboxylase Neighboring gene ribosomal protein L31, pseudogene 20 Neighboring gene STARR-seq mESC enhancer starr_45905 Neighboring gene STARR-seq mESC enhancer starr_45906 Neighboring gene STARR-seq mESC enhancer starr_45907 Neighboring gene STARR-seq mESC enhancer starr_45908 Neighboring gene STARR-seq mESC enhancer starr_45909 Neighboring gene protein dpy-30 homolog Neighboring gene predicted gene, 36319

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (4) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables calcium-dependent protein binding ISO
Inferred from Sequence Orthology
more info
 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 
enables galactose binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables mannose binding ISO
Inferred from Sequence Orthology
more info
 
enables phosphatidylinositol-4-phosphate binding ISO
Inferred from Sequence Orthology
more info
 
enables protease binding ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in antiviral innate immune response ISO
Inferred from Sequence Orthology
more info
 
involved_in cell surface pattern recognition receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within complement activation, classical pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within complement activation, lectin pathway IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within complement activation, lectin pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within complement activation, lectin pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within complement activation, lectin pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within defense response to Gram-positive bacterium IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within defense response to Gram-positive bacterium ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
involved_in innate immune response ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within killing by host of symbiont cells IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in negative regulation of viral process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of complement activation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of opsonization ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phagocytosis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within positive regulation of phagocytosis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of protein processing ISO
Inferred from Sequence Orthology
more info
 
involved_in proteolysis ISO
Inferred from Sequence Orthology
more info
 
involved_in surfactant homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of collagen trimer IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
is_active_in multivesicular body IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 
part_of serine-type endopeptidase complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mannose-binding protein C
Names
RA-reactive factor P28A subunit
mannan-binding protein
mannose binding lectin, liver (C)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001365058.1NP_001351987.1  mannose-binding protein C precursor

    Status: VALIDATED

    Source sequence(s)
    AC157986
    Consensus CDS
    CCDS29742.1
    UniProtKB/Swiss-Prot
    P41317
    UniProtKB/TrEMBL
    Q3UEK1
    Conserved Domains (2) summary
    pfam01391
    Location:3693
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:132242
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
  2. NM_010776.2NP_034906.1  mannose-binding protein C precursor

    See identical proteins and their annotated locations for NP_034906.1

    Status: VALIDATED

    Source sequence(s)
    AK149484, DV653788
    Consensus CDS
    CCDS29742.1
    UniProtKB/Swiss-Prot
    P41317
    UniProtKB/TrEMBL
    Q3UEK1
    Related
    ENSMUSP00000025797.6, ENSMUST00000025797.7
    Conserved Domains (2) summary
    pfam01391
    Location:3693
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:132242
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    30210306..30217087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006526730.1XP_006526793.1  mannose-binding protein C isoform X1

    See identical proteins and their annotated locations for XP_006526793.1

    UniProtKB/Swiss-Prot
    P41317
    UniProtKB/TrEMBL
    Q3UEK1
    Conserved Domains (2) summary
    pfam01391
    Location:3693
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:132242
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain