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Mobp myelin-associated oligodendrocytic basic protein [ Mus musculus (house mouse) ]

Gene ID: 17433, updated on 23-Jun-2021

Summary

Official Symbol
Mobpprovided by MGI
Official Full Name
myelin-associated oligodendrocytic basic proteinprovided by MGI
Primary source
MGI:MGI:108511
See related
Ensembl:ENSMUSG00000032517
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MOBP1; MOBP69; MOBP73; MOBP81; R74645; MOBP155; MOBP170; AI835053; AI839848
Expression
Biased expression in cerebellum adult (RPKM 138.0), cortex adult (RPKM 97.6) and 1 other tissue See more
Orthologs
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Genomic context

See Mobp in Genome Data Viewer
Location:
9 F4; 9 71.41 cM
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (119978740..120010554)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (120149742..120181488)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (120058860..120085209)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, H/ACA box 62 Neighboring gene ribosomal protein SA Neighboring gene predicted gene 5922 Neighboring gene predicted gene, 38642 Neighboring gene predicted gene, 47059

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables actin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables myosin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of myelin sheath IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of myelin sheath ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cortical actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in myelin sheath HDA PubMed 
located_in myelin sheath ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
myelin-associated oligodendrocyte basic protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039365.3NP_001034454.1  myelin-associated oligodendrocyte basic protein isoform b

    See identical proteins and their annotated locations for NP_001034454.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate 3' terminal exon compared to variant 1. The resulting protein (isoform b) is longer and has a distinct C-terminus compared to isoform a.
    Source sequence(s)
    AI839250, AK140055
    Consensus CDS
    CCDS23626.1
    UniProtKB/Swiss-Prot
    Q9D2P8
    Related
    ENSMUSP00000071084.8, ENSMUST00000068698.15
    Conserved Domains (2) summary
    PTZ00449
    Location:79165
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cl22851
    Location:168
    PHD_SF; PHD finger superfamily
  2. NM_008614.3NP_032640.1  myelin-associated oligodendrocyte basic protein isoform a

    See identical proteins and their annotated locations for NP_032640.1

    Status: VALIDATED

    Source sequence(s)
    AK028057, BX630280
    Consensus CDS
    CCDS40808.1
    UniProtKB/Swiss-Prot
    Q9D2P8
    Related
    ENSMUSP00000091287.2, ENSMUST00000093773.8
    Conserved Domains (1) summary
    cl22851
    Location:167
    PHD_SF; PHD finger superfamily

RNA

  1. NR_153958.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK083103, CD776657
  2. NR_153959.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC110091
  3. NR_153960.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC110091

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    119978740..120010554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004935332.1 RNA Sequence

  2. XR_004935333.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039364.2: Suppressed sequence

    Description
    NM_001039364.2: This RefSeq has been removed because currently there is insufficient support for the transcript.
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