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mec-12 Detyrosinated tubulin alpha-3 chain [ Caenorhabditis elegans ]

Gene ID: 175419, updated on 22-Aug-2021

Summary

Gene symbol
mec-12
Gene description
Detyrosinated tubulin alpha-3 chain
Primary source
WormBase:WBGene00003175
Locus tag
CELE_C44B11.3
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See mec-12 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (3131574..3139234, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene NIPA1 (NonImprinted gene in Prader-Willi/Angelman syndrome region 1) homolog Neighboring gene Maleylacetoacetate isomerase Neighboring gene Uncharacterized protein Neighboring gene ncRNA

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in axon IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in microtubule IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Detyrosinated tubulin alpha-3 chain
NP_497663.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    3131574..3139234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065262.6NP_497663.1  Detyrosinated tubulin alpha-3 chain [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497663.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P91910
    Conserved Domains (2) summary
    PTZ00335
    Location:1448
    PTZ00335; tubulin alpha chain; Provisional
    cd02186
    Location:2435
    alpha_tubulin; The alpha-tubulin family
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