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Prol1 proline rich, lacrimal 1 [ Mus musculus (house mouse) ]

Gene ID: 17830, updated on 20-Jul-2021

Summary

Official Symbol
Prol1provided by MGI
Official Full Name
proline rich, lacrimal 1provided by MGI
Primary source
MGI:MGI:107496
See related
Ensembl:ENSMUSG00000064156
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Muc10
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Prol1 in Genome Data Viewer
Location:
5; 5 E1
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88465171..88476676)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (88317312..88328817)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88746337..88757842)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene submaxillary gland androgen regulated protein 2 like Neighboring gene RIKEN cDNA 1700041A01 gene Neighboring gene amelotin Neighboring gene chromobox protein homolog 3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
mucin-7
Names
mucin 10, submandibular gland salivary mucin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008644.2NP_032670.2  mucin-7 precursor

    Status: VALIDATED

    Source sequence(s)
    AC163331
    Consensus CDS
    CCDS51537.1
    UniProtKB/TrEMBL
    E9PYQ4
    Related
    ENSMUSP00000132678.2, ENSMUST00000170832.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    88465171..88476676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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