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abu-8 Activated in Blocked Unfolded protein response [ Caenorhabditis elegans ]

Gene ID: 178904, updated on 7-Sep-2023

Summary

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Gene symbol
abu-8
Gene description
Activated in Blocked Unfolded protein response
Primary source
WormBase:WBGene00000031
Locus tag
CELE_C03A7.14
See related
AllianceGenome:WB:WBGene00000031
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in pharynx development. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See abu-8 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (5192995..5194608, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene glucuronosyltransferase Neighboring gene glucuronosyltransferase Neighboring gene Reverse transcriptase domain-containing protein Neighboring gene Venom polypeptide Neighboring gene TPR_REGION domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynamically-expressed prion-like proteins form a cuticle in the pharynx of Caenorhabditis elegans. George-Raizen JB, et al. Biol Open, 2014 Oct 31. PMID 25361578, Free PMC Article
  2. Neuronal GPCR controls innate immunity by regulating noncanonical unfolded protein response genes. Sun J, et al. Science, 2011 May 6. PMID 21474712, Free PMC Article
  3. Unfolded protein response genes regulated by CED-1 are required for Caenorhabditis elegans innate immunity. Haskins KA, et al. Dev Cell, 2008 Jul. PMID 18606143, Free PMC Article
  4. A role for SIR-2.1 regulation of ER stress response genes in determining C. elegans life span. Viswanathan M, et al. Dev Cell, 2005 Nov. PMID 16256736
  5. Muscle-epidermis interactions affect exoskeleton patterning in Caenorhabditis elegans. Broday L, et al. Dev Dyn, 2007 Nov. PMID 17937397

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response HEP PubMed 
involved_in pharynx development IGI
Inferred from Genetic Interaction
more info
 PubMed 

General protein information

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Preferred Names
Activated in Blocked Unfolded protein response
NP_504393.1
  • Product from WormBase gene class abu;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    5192995..5194608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071992.6 → NP_504393.1  Activated in Blocked Unfolded protein response [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504393.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O16511
Nucleotide Protein
Heading Accession and Version

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