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nmy-1 Non-muscle MYosin [ Caenorhabditis elegans ]

Gene ID: 180581, updated on 8-Jul-2021

Summary

Gene symbol
nmy-1
Gene description
Non-muscle MYosin
Primary source
WormBase:WBGene00003776
Locus tag
CELE_F52B10.1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See nmy-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
19
Sequence:
Chromosome: X; NC_003284.9 (2909527..2918044)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Sulfotransfer_1 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in locomotion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nematode larval development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in nematode larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of embryonic cell shape IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in regulation of embryonic cell shape IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in adherens junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in contractile fiber IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in myofibril IEA
Inferred from Electronic Annotation
more info
 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 
located_in myosin filament IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Non-muscle MYosin
NP_001362097.1
  • Product from WormBase gene class nmy;
    Confirmed by transcript evidence
NP_508504.2
  • Product from WormBase gene class nmy;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    2909527..2918044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076103.6NP_508504.2  Non-muscle MYosin [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508504.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20641
    Conserved Domains (4) summary
    cd01377
    Location:92770
    MYSc_class_II; class II myosins, motor domain
    pfam00063
    Location:80770
    Myosin_head; Myosin head (motor domain)
    pfam01576
    Location:8471919
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:2765
    Myosin_N; Myosin N-terminal SH3-like domain
  2. NM_001374981.3NP_001362097.1  Non-muscle MYosin [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (3) summary
    cd01377
    Location:92763
    MYSc_class_II; class II myosins, motor domain
    pfam01576
    Location:8401912
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:2665
    Myosin_N; Myosin N-terminal SH3-like domain
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