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Nudc nudC nuclear distribution protein [ Mus musculus (house mouse) ]

Gene ID: 18221, updated on 23-Jun-2021

Summary

Official Symbol
Nudcprovided by MGI
Official Full Name
nudC nuclear distribution proteinprovided by MGI
Primary source
MGI:MGI:106014
See related
Ensembl:ENSMUSG00000028851
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nud; Sil; SIG-92; Silg92
Expression
Ubiquitous expression in CNS E11.5 (RPKM 117.1), liver E14 (RPKM 77.3) and 26 other tissues See more
Orthologs
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Genomic context

See Nudc in Genome Data Viewer
Location:
4; 4 D2.3
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (133259853..133273338, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (133532542..133546027, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (133088457..133101942, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene TMF1-regulated nuclear protein 1 Neighboring gene predicted gene, 42323 Neighboring gene keratinocyte differentiation factor 1 Neighboring gene nuclear receptor subfamily 0, group B, member 2 Neighboring gene G patch domain containing 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables unfolded protein binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic metaphase plate congression ISO
Inferred from Sequence Orthology
more info
 
involved_in mitotic spindle organization ISO
Inferred from Sequence Orthology
more info
 
involved_in nuclear migration ISO
Inferred from Sequence Orthology
more info
 
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
located_in midbody ISO
Inferred from Sequence Orthology
more info
 
located_in mitotic spindle ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
nuclear migration protein nudC
Names
nuclear distribution gene C homolog
nuclear distribution protein C homolog
silica-induced gene 92 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010948.3NP_035078.1  nuclear migration protein nudC

    See identical proteins and their annotated locations for NP_035078.1

    Status: VALIDATED

    Source sequence(s)
    AK032673, BE948227, DV652222
    Consensus CDS
    CCDS18750.1
    UniProtKB/Swiss-Prot
    O35685
    Related
    ENSMUSP00000030665.7, ENSMUST00000030665.7
    Conserved Domains (3) summary
    cd06492
    Location:173259
    p23_mNUDC_like; p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) ...
    pfam14050
    Location:960
    Nudc_N; N-terminal conserved domain of Nudc
    pfam16273
    Location:98144
    NuDC; Nuclear distribution C domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    133259853..133273338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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