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CANTEDRAFT_99717 BING4CT-domain-containing protein [ Yamadazyma tenuis ATCC 10573 ]

Gene ID: 18250876, updated on 23-Oct-2023

Summary

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Gene symbol
CANTEDRAFT_99717
Gene description
BING4CT-domain-containing protein
Locus tag
CANTEDRAFT_99717
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Yamadazyma tenuis ATCC 10573 (strain: ATCC 10573, culture-collection: ATCC:10573, type-material: type material of Yamadazyma tenuis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Yamadazyma
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Genomic context

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Location:
chromosome: Unknown
Exon count:
1

NW_006281247.1Genomic Context describing neighboring genes Neighboring gene ATPase, V1 complex, subunit C Neighboring gene Cut8-domain-containing protein Neighboring gene SURF1-domain-containing protein;uncharacterized protein Neighboring gene dihydroorotate dehydrogenase precursor;uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006281247.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Wohlbach DJ, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21788494, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BING4CT-domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006281247.1 Reference assembly

    Range
    671445..673025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006689376.1 → XP_006689439.1  BING4CT-domain-containing protein [Yamadazyma tenuis ATCC 10573]

    See identical proteins and their annotated locations for XP_006689439.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3BCW4
    Conserved Domains (4) summary
    COG2319
    Location:112 → 372
    WD40; WD40 repeat [General function prediction only]
    pfam08149
    Location:345 → 423
    BING4CT; BING4CT (NUC141) domain
    sd00039
    Location:108 → 141
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:108 → 335
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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