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srm-3 Serpentine Receptor, class M [ Caenorhabditis elegans ]

Gene ID: 186545, updated on 7-Sep-2023

Summary

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Gene symbol
srm-3
Gene description
Serpentine Receptor, class M
Primary source
WormBase:WBGene00010273
Locus tag
CELE_F58G6.2
See related
AllianceGenome:WB:WBGene00010273
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in excretory cell; intestine; neurons; and pharynx. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See srm-3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (9648982..9650550)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene DEgenerin Like Neighboring gene DEGenerin channel-Like Neighboring gene Amphiphysin Neighboring gene Copper transport protein Neighboring gene Copper transport protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class M
NP_001255412.1
  • Product from WormBase gene class srm;
    Confirmed by transcript evidence
NP_001255413.1
  • Product from WormBase gene class srm;
    Confirmed by transcript evidence
NP_001380225.1
  • Product from WormBase gene class srm;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9648982..9650550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001268484.3 → NP_001255413.1  Serpentine Receptor, class M [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255413.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21008
    Conserved Domains (1) summary
    cl22924
    Location:164 → 268
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

  2. NM_001268483.3 → NP_001255412.1  Serpentine Receptor, class M [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255412.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2S4
    Conserved Domains (1) summary
    cl22924
    Location:79 → 183
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

  3. NM_001392372.1 → NP_001380225.1  Serpentine Receptor, class M [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2C9C3M6
    Conserved Domains (1) summary
    cl22924
    Location:2 → 59
    7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str
Nucleotide Protein
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