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SPAPADRAFT_72021 serine palmitoyltransferase 2 [ Spathaspora passalidarum NRRL Y-27907 ]

Gene ID: 18875408, updated on 30-Dec-2023

Summary

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Gene symbol
SPAPADRAFT_72021
Gene description
serine palmitoyltransferase 2
Locus tag
SPAPADRAFT_72021
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Spathaspora passalidarum NRRL Y-27907 (strain: NRRL Y-27907, type-material: type material of Spathaspora passalidarum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Spathaspora
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Genomic context

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Location:
chromosome: Unknown
Exon count:
1

NW_006767428.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767428.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Wohlbach DJ, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21788494, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine C-palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767428.1 Reference assembly

    Range
    1742980..1744985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007375873.1 → XP_007375935.1  serine palmitoyltransferase 2 [Spathaspora passalidarum NRRL Y-27907]

    See identical proteins and their annotated locations for XP_007375935.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3AP88
    Conserved Domains (2) summary
    PLN02483
    Location:57 → 525
    PLN02483; serine palmitoyltransferase
    COG0156
    Location:106 → 518
    BioF; 7-keto-8-aminopelargonate synthetase or related enzyme [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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