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Pxmp2 peroxisomal membrane protein 2 [ Mus musculus (house mouse) ]

Gene ID: 19301, updated on 16-Oct-2021

Summary

Official Symbol
Pxmp2provided by MGI
Official Full Name
peroxisomal membrane protein 2provided by MGI
Primary source
MGI:MGI:107487
See related
Ensembl:ENSMUSG00000029499
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
22kDa; PMP22
Expression
Biased expression in liver adult (RPKM 63.7), heart adult (RPKM 27.3) and 9 other tissues See more
Orthologs
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Genomic context

See Pxmp2 in Genome Data Viewer
Location:
5 F; 5 53.44 cM
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (110422152..110434087, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (110274286..110286222, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (110703305..110715187, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and LEM domain containing 2 Neighboring gene phosphoglycerate mutase family member 5 Neighboring gene polymerase (DNA directed), epsilon Neighboring gene predicted gene, 26277 Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in peroxisomal membrane ISO
Inferred from Sequence Orthology
more info
 
located_in peroxisomal membrane TAS
Traceable Author Statement
more info
 
located_in peroxisome ISO
Inferred from Sequence Orthology
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
peroxisomal membrane protein 2
Names
22 kDa peroxisomal membrane protein
peroxisomal membrane protein 2, 22 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008993.2NP_033019.2  peroxisomal membrane protein 2

    See identical proteins and their annotated locations for NP_033019.2

    Status: VALIDATED

    Source sequence(s)
    AK003118, BI134291, BY090564
    Consensus CDS
    CCDS19524.1
    UniProtKB/Swiss-Prot
    P42925
    UniProtKB/TrEMBL
    Q5D073
    Related
    ENSMUSP00000031472.6, ENSMUST00000031472.12
    Conserved Domains (1) summary
    pfam04117
    Location:129191
    Mpv17_PMP22; Mpv17 / PMP22 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    110422152..110434087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249418.3XP_011247720.1  peroxisomal membrane protein 2 isoform X1

    Conserved Domains (1) summary
    pfam04117
    Location:60121
    Mpv17_PMP22; Mpv17 / PMP22 family
  2. XM_036164916.1XP_036020809.1  peroxisomal membrane protein 2 isoform X2

    Conserved Domains (1) summary
    pfam04117
    Location:3798
    Mpv17_PMP22; Mpv17 / PMP22 family
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