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lncRNA:CR45361 long non-coding RNA:CR45361 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 19834877, updated on 26-Apr-2024

Summary

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Official Symbol
lncRNA:CR45361provided by FlyBase
Official Full Name
long non-coding RNA:CR45361provided by FlyBase
Primary source
FLYBASE:FBgn0266901
Locus tag
Dmel_CR45361
See related
AllianceGenome:FB:FBgn0266901
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR45361; Dmel\CR45361; pri-mir-1
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Genomic context

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See lncRNA:CR45361 in Genome Data Viewer
Location:
38C8-38C8; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20484399..20487548)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20486522..20487548)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44980 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43234 Neighboring gene long non-coding RNA:CR46416 Neighboring gene long non-coding RNA:CR45360 Neighboring gene long non-coding RNA:CR45359 Neighboring gene mir-1 stem loop

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Drosophila embryo at single-cell transcriptome resolution. Karaiskos N, et al. Science, 2017 Oct 13. PMID 28860209
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR45361-RA; Dmel\lncRNA:CR45361-RA; CR45361-RA; Dmel\CR45361-RA
  • lncRNA:CR45361-RB; Dmel\lncRNA:CR45361-RB; CR45361-RB; Dmel\CR45361-RB

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    20484399..20487548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_133091.1 RNA Sequence

    Status: REVIEWED

  2. NR_124396.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.