Format

Send to:

Choose Destination

Rpl36a ribosomal protein L36A [ Mus musculus (house mouse) ]

Gene ID: 19982, updated on 23-Jun-2021

Summary

Official Symbol
Rpl36aprovided by MGI
Official Full Name
ribosomal protein L36Aprovided by MGI
Primary source
MGI:MGI:1201789
See related
Ensembl:ENSMUSG00000079435
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
L4; Rp; L44L; Rpl44
Expression
Broad expression in liver E14 (RPKM 448.8), liver E14.5 (RPKM 302.2) and 19 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Rpl36a in Genome Data Viewer
Location:
X; X E3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (133486403..133488811)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (134585654..134588062)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (131120193..131122601)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane 8A1 Neighboring gene Bruton agammaglobulinemia tyrosine kinase Neighboring gene galactosidase, alpha Neighboring gene heterogeneous nuclear ribonucleoprotein H2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of cytosolic large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
located_in cytosolic ribosome ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in polysomal ribosome ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
60S ribosomal protein L36a
Names
60S ribosomal protein L44
ribosomal protein L44

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019865.5NP_063918.1  60S ribosomal protein L36a

    See identical proteins and their annotated locations for NP_063918.1

    Status: VALIDATED

    Source sequence(s)
    AK012502, AV453514, BU529569
    Consensus CDS
    CCDS41123.1
    UniProtKB/Swiss-Prot
    P83882
    UniProtKB/TrEMBL
    Q5M9P1
    Related
    ENSMUSP00000108837.2, ENSMUST00000113211.8
    Conserved Domains (1) summary
    PTZ00157
    Location:186
    PTZ00157; 60S ribosomal protein L36a; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    133486403..133488811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center