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Smr3a submaxillary gland androgen regulated protein 3A [ Mus musculus (house mouse) ]

Gene ID: 20599, updated on 23-Jun-2021

Summary

Official Symbol
Smr3aprovided by MGI
Official Full Name
submaxillary gland androgen regulated protein 3Aprovided by MGI
Primary source
MGI:MGI:102763
See related
Ensembl:ENSMUSG00000029280
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sm; MSG; MSG1; MSG3; Smr1; Smr3; AA589601
Expression
Low expression observed in reference dataset See more
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Genomic context

See Smr3a in Genome Data Viewer
Location:
5; 5 E1
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88139414..88156393)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (87991555..88008534)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88431550..88437559)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700066N21 gene Neighboring gene cDNA sequence BC051076 Neighboring gene calcium binding protein, spermatid specific 1 Neighboring gene heat shock protein 5 pseudogene Neighboring gene submaxillary gland androgen regulated protein 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of sensory perception of pain IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
submaxillary gland androgen-regulated protein 3A
Names
salivary protein MSG1
submaxillary gland androgen regulated protein 3
submaxillary gland androgen-regulated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011422.3NP_035552.1  submaxillary gland androgen-regulated protein 3A precursor

    See identical proteins and their annotated locations for NP_035552.1

    Status: VALIDATED

    Source sequence(s)
    AA727574, AC154123, BF454619
    Consensus CDS
    CCDS19398.1
    UniProtKB/Swiss-Prot
    Q61900
    Related
    ENSMUSP00000031211.5, ENSMUST00000031211.6
    Conserved Domains (1) summary
    pfam15621
    Location:130
    PROL5-SMR; Proline-rich submaxillary gland androgen-regulated family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    88139414..88156393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017320753.2XP_017176242.1  submaxillary gland androgen-regulated protein 3A isoform X1

    UniProtKB/Swiss-Prot
    Q61900
    Conserved Domains (1) summary
    pfam15621
    Location:130
    PROL5-SMR; Proline-rich submaxillary gland androgen-regulated family

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_011423.2: Suppressed sequence

    Description
    NM_011423.2: This RefSeq was permanently suppressed because currently there is not sufficient data to support this transcript.
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