Format

Send to:

Choose Destination

Sprr2a1 small proline-rich protein 2A1 [ Mus musculus (house mouse) ]

Gene ID: 20755, updated on 23-Jun-2021

Summary

Official Symbol
Sprr2a1provided by MGI
Official Full Name
small proline-rich protein 2A1provided by MGI
Primary source
MGI:MGI:1330350
See related
Ensembl:ENSMUSG00000078664
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
S; Sprr2a; Sprr2a3
Expression
Biased expression in stomach adult (RPKM 5151.3), small intestine adult (RPKM 3157.6) and 4 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Sprr2a1 in Genome Data Viewer
Location:
3 F1; 3 40.14 cM
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92123142..92129798)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92215835..92222491)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (92019757..92026413)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene late cornified envelope-like proline-rich 1 Neighboring gene predicted gene, 35439 Neighboring gene ribosomal protein L3 pseudogene Neighboring gene small proline-rich protein 2A2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
small proline-rich protein 2A

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011468.4NP_035598.2  small proline-rich protein 2A

    See identical proteins and their annotated locations for NP_035598.2

    Status: VALIDATED

    Source sequence(s)
    AC148095, AK168529, BY062071
    Consensus CDS
    CCDS17548.1
    UniProtKB/Swiss-Prot
    Q4KL71, Q9CQK8
    Related
    ENSMUSP00000083330.5, ENSMUST00000074449.7

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    92123142..92129798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center