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Ankrd33 ankyrin repeat domain 33 [ Mus musculus (house mouse) ]

Gene ID: 208258, updated on 23-Jun-2021

Summary

Official Symbol
Ankrd33provided by MGI
Official Full Name
ankyrin repeat domain 33provided by MGI
Primary source
MGI:MGI:2443398
See related
Ensembl:ENSMUSG00000047034
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pa; Panky; Panky-a; A930021G21Rik
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Ankrd33 in Genome Data Viewer
Location:
15; 15 F1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101013625..101017923)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101115744..101120028)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (100946186..100950459)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene fidgetin-like 2 Neighboring gene predicted gene, 53912 Neighboring gene predicted gene, 41402 Neighboring gene activin A receptor, type II-like 1 Neighboring gene activin A receptor, type 1B Neighboring gene microRNA 6962

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC31569

General protein information

Preferred Names
photoreceptor ankyrin repeat protein
Names
ankyrin repeat domain-containing protein 33
photorecptor ankyrin repeat protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355656.1NP_001342585.1  photoreceptor ankyrin repeat protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC104834
    Conserved Domains (2) summary
    cd00204
    Location:1118
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:2962
    ANK; ANK repeat [structural motif]
  2. NM_001374225.1NP_001361154.1  photoreceptor ankyrin repeat protein isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC104834
    Related
    ENSMUSP00000155584.2, ENSMUST00000229954.2
    Conserved Domains (4) summary
    sd00045
    Location:5385
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:58153
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:1873
    Ank_4; Ankyrin repeats (many copies)
    cl39094
    Location:127192
    Ank_2; Ankyrin repeats (3 copies)
  3. NM_144790.1NP_659039.1  photoreceptor ankyrin repeat protein isoform 1

    See identical proteins and their annotated locations for NP_659039.1

    Status: VALIDATED

    Source sequence(s)
    BC022726
    Consensus CDS
    CCDS27845.1
    UniProtKB/Swiss-Prot
    Q8BXP5
    Related
    ENSMUSP00000067028.7, ENSMUST00000070875.8
    Conserved Domains (3) summary
    cd00204
    Location:7128
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:10105
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:537
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    101013625..101017923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036159294.1XP_036015187.1  photoreceptor ankyrin repeat protein isoform X1

    Conserved Domains (2) summary
    sd00045
    Location:2962
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:195
    Ank_2; Ankyrin repeats (3 copies)
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