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Zfp273 zinc finger protein 273 [ Mus musculus (house mouse) ]

Gene ID: 212569, updated on 23-Jun-2021

Summary

Official Symbol
Zfp273provided by MGI
Official Full Name
zinc finger protein 273provided by MGI
Primary source
MGI:MGI:3036278
See related
Ensembl:ENSMUSG00000030446
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rslcan1; 6820416H06Rik
Expression
Broad expression in CNS E18 (RPKM 2.2), CNS E14 (RPKM 2.1) and 22 other tissues See more
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Genomic context

See Zfp273 in Genome Data Viewer
Location:
13; 13 B3
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (67961935..67975119)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (67813816..67827000)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (67914753..67927937)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 493 Neighboring gene RIKEN cDNA 4930525G20 gene Neighboring gene ribosomal protein, large, P0 pseudogene Neighboring gene predicted gene 10037 Neighboring gene cDNA sequence BC048507

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
zinc finger protein 273
Names
regulator of sex-limitation candidate 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198322.3NP_938081.2  zinc finger protein 273

    See identical proteins and their annotated locations for NP_938081.2

    Status: VALIDATED

    Source sequence(s)
    AK078495, BK001639
    Consensus CDS
    CCDS49305.1
    UniProtKB/TrEMBL
    Q7M6W8, Q8BIF3
    Related
    ENSMUSP00000137903.2, ENSMUST00000181391.8
    Conserved Domains (5) summary
    smart00349
    Location:565
    KRAB; krueppel associated box
    COG5048
    Location:79463
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:83103
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:544
    KRAB; KRAB box
    pfam13465
    Location:123148
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    67961935..67975119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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