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Kctd7 potassium channel tetramerisation domain containing 7 [ Mus musculus (house mouse) ]

Gene ID: 212919, updated on 23-Jun-2021

Summary

Official Symbol
Kctd7provided by MGI
Official Full Name
potassium channel tetramerisation domain containing 7provided by MGI
Primary source
MGI:MGI:2442265
See related
Ensembl:ENSMUSG00000034110
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4932409E18; 9430010P06Rik
Expression
Ubiquitous expression in testis adult (RPKM 5.8), adrenal adult (RPKM 4.4) and 27 other tissues See more
Orthologs
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Genomic context

See Kctd7 in Genome Data Viewer
Location:
5; 5 G1.3
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (130166814..130183960)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (130137978..130155119)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (130620758..130631678)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene calcitonin gene-related peptide-receptor component protein Neighboring gene predicted gene, 54305 Neighboring gene protein-tyrosine sulfotransferase 1 Neighboring gene RAB guanine nucleotide exchange factor (GEF) 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit A12, pseudogene Neighboring gene predicted gene 15921

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in cellular potassium ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glutamate homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in membrane hyperpolarization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in membrane hyperpolarization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in positive regulation of transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
BTB/POZ domain-containing protein KCTD7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172509.4NP_766097.1  BTB/POZ domain-containing protein KCTD7

    See identical proteins and their annotated locations for NP_766097.1

    Status: VALIDATED

    Source sequence(s)
    AC122339
    Consensus CDS
    CCDS19707.1
    UniProtKB/Swiss-Prot
    Q8BJK1
    Related
    ENSMUSP00000044568.3, ENSMUST00000040616.9
    Conserved Domains (1) summary
    cd18366
    Location:48139
    BTB_POZ_KCTD7; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 7 (KCTD7)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    130166814..130183960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164981.1XP_036020874.1  BTB/POZ domain-containing protein KCTD7 isoform X1

    Conserved Domains (1) summary
    cd18366
    Location:48139
    BTB_POZ_KCTD7; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 7 (KCTD7)
  2. XM_006504401.4XP_006504464.1  BTB/POZ domain-containing protein KCTD7 isoform X2

    Conserved Domains (1) summary
    cl38908
    Location:164
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
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