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Prmt7 protein arginine N-methyltransferase 7 [ Mus musculus (house mouse) ]

Gene ID: 214572, updated on 21-Apr-2024

Summary

Official Symbol
Prmt7provided by MGI
Official Full Name
protein arginine N-methyltransferase 7provided by MGI
Primary source
MGI:MGI:2384879
See related
Ensembl:ENSMUSG00000060098 AllianceGenome:MGI:2384879
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933402B05Rik
Summary
Enables histone methyltransferase activity (H4-R3 specific) and protein-arginine omega-N symmetric methyltransferase activity. Involved in DNA methylation involved in gamete generation; histone arginine methylation; and regulation of gene expression by genetic imprinting. Predicted to be located in cytosol; fibrillar center; and nucleoplasm. Is expressed in several structures, including brain and retina nuclear layer. Orthologous to human PRMT7 (protein arginine methyltransferase 7). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis adult (RPKM 37.9), ovary adult (RPKM 19.4) and 28 other tissues See more
Orthologs
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Genomic context

Location:
8 D3; 8 53.11 cM
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (106937686..106978326)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (106211054..106251694)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 Neighboring gene solute carrier family 7, member 6 opposite strand Neighboring gene sphingomyelin phosphodiesterase 3, neutral Neighboring gene RIKEN cDNA 4930506A18 gene Neighboring gene STARR-positive B cell enhancer ABC_E111 Neighboring gene STARR-positive B cell enhancer ABC_E5038 Neighboring gene predicted gene, 39238

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (6)  1 citation
  • Endonuclease-mediated (4) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC7929

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables histone H4 methyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables histone H4R3 methyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables histone binding ISO
Inferred from Sequence Orthology
more info
 
enables histone methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-arginine N-methyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-arginine omega-N monomethyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-arginine omega-N symmetric methyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein-arginine omega-N symmetric methyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables ribonucleoprotein complex binding ISO
Inferred from Sequence Orthology
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within chromatin organization IEA
Inferred from Electronic Annotation
more info
 
involved_in chromatin remodeling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in genomic imprinting IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within methylation IEA
Inferred from Electronic Annotation
more info
 
involved_in peptidyl-arginine methylation ISO
Inferred from Sequence Orthology
more info
 
involved_in peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein methylation IEA
Inferred from Electronic Annotation
more info
 
involved_in spliceosomal snRNP assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in fibrillar center ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
protein arginine N-methyltransferase 7
Names
[Myelin basic protein]-arginine N-methyltransferase PRMT7
histone-arginine N-methyltransferase PRMT7
NP_663379.1
XP_006530891.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145404.1NP_663379.1  protein arginine N-methyltransferase 7

    See identical proteins and their annotated locations for NP_663379.1

    Status: PROVISIONAL

    Source sequence(s)
    BC006705
    Consensus CDS
    CCDS22633.1
    UniProtKB/Swiss-Prot
    Q3TRZ6, Q69Z62, Q6B955, Q6PG80, Q922X9
    Related
    ENSMUSP00000071521.6, ENSMUST00000071592.12
    Conserved Domains (1) summary
    cl17173
    Location:37186
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    106937686..106978326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530828.5XP_006530891.1  protein arginine N-methyltransferase 7 isoform X1