Format

Send to:

Choose Destination

Traf3ip3 TRAF3 interacting protein 3 [ Mus musculus (house mouse) ]

Gene ID: 215243, updated on 23-Jun-2021

Summary

Official Symbol
Traf3ip3provided by MGI
Official Full Name
TRAF3 interacting protein 3provided by MGI
Primary source
MGI:MGI:2441706
See related
Ensembl:ENSMUSG00000037318
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
T3jam; AI115021; 6030423D04Rik
Expression
Biased expression in thymus adult (RPKM 26.7), spleen adult (RPKM 17.6) and 7 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Traf3ip3 in Genome Data Viewer
Location:
1; 1 H6
Exon count:
16
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (192857812..192883854, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (193175504..193201546, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (195001698..195027740, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene UTP25 small subunit processome component Neighboring gene RIKEN cDNA A130010J15 gene Neighboring gene interferon regulatory factor 6 Neighboring gene hydroxysteroid 11-beta dehydrogenase 1 Neighboring gene G0/G1 switch gene 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC41284, MGC106845

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
TRAF3-interacting JNK-activating modulator
Names
TRAF3-interacting Jun N-terminal kinase (JNK)-activating modulator

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153137.4NP_694777.3  TRAF3-interacting JNK-activating modulator

    See identical proteins and their annotated locations for NP_694777.3

    Status: VALIDATED

    Source sequence(s)
    AK031400, AK041994, BC036561, BC137605
    Consensus CDS
    CCDS15634.1
    UniProtKB/Swiss-Prot
    Q8C0G2
    UniProtKB/TrEMBL
    B2RPU5, G3X949
    Related
    ENSMUSP00000040977.5, ENSMUST00000043550.11
    Conserved Domains (1) summary
    COG4372
    Location:216437
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    192857812..192883854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center