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Mfsd4b1 major facilitator superfamily domain containing 4B1 [ Mus musculus (house mouse) ]

Gene ID: 215929, updated on 23-Jun-2021

Summary

Official Symbol
Mfsd4b1provided by MGI
Official Full Name
major facilitator superfamily domain containing 4B1provided by MGI
Primary source
MGI:MGI:2143575
See related
Ensembl:ENSMUSG00000038522
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI3173; Naglt1a; AI317395; AI482555
Expression
Biased expression in kidney adult (RPKM 31.8), liver adult (RPKM 11.3) and 1 other tissue See more
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Genomic context

See Mfsd4b1 in Genome Data Viewer
Location:
10; 10 B1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (39877569..39901264, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (40001573..40025268, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (39721379..39745074, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 4B3, pseudogene Neighboring gene neutrophil immunoglobulin-like receptor 1 Neighboring gene major facilitator superfamily domain containing 4B5 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 10 Neighboring gene predicted gene, 25613 Neighboring gene predicted gene, 31992

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Clone Names

  • MGC25869

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables glucose transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within ion transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within sodium ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
sodium-dependent glucose transporter 1A
Names
major facilitator superfamily domain-containing protein 4B1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_144821.4NP_659070.2  sodium-dependent glucose transporter 1A

    See identical proteins and their annotated locations for NP_659070.2

    Status: VALIDATED

    Source sequence(s)
    AC168279
    Consensus CDS
    CCDS35884.2
    UniProtKB/Swiss-Prot
    Q8VCV9
    Related
    ENSMUSP00000128324.3, ENSMUST00000163705.3
    Conserved Domains (2) summary
    cd06174
    Location:1404
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    PRK03699
    Location:12422
    PRK03699; putative transporter; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    39877569..39901264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006512696.5XP_006512759.1  sodium-dependent glucose transporter 1A isoform X1

    Conserved Domains (1) summary
    cl28910
    Location:1339
    MFS; Major Facilitator Superfamily
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