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Tcp11l2 t-complex 11 (mouse) like 2 [ Mus musculus (house mouse) ]

Gene ID: 216198, updated on 5-Mar-2024

Summary

Official Symbol
Tcp11l2provided by MGI
Official Full Name
t-complex 11 (mouse) like 2provided by MGI
Primary source
MGI:MGI:2444679
See related
Ensembl:ENSMUSG00000020034 AllianceGenome:MGI:2444679
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
E430026E19Rik
Summary
Predicted to be involved in signal transduction. Is expressed in axial skeleton; glans of male genital tubercle; limb; liver lobe; and nervous system. Orthologous to human TCP11L2 (t-complex 11 like 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in heart adult (RPKM 29.5), ovary adult (RPKM 19.2) and 28 other tissues See more
Orthologs
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Genomic context

Location:
10 C1; 10 41.55 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (84412811..84450219)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (84576947..84614355)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_27417 Neighboring gene pluripotency associated transcript 7 Neighboring gene STARR-positive B cell enhancer ABC_E3904 Neighboring gene STARR-positive B cell enhancer ABC_E6893 Neighboring gene predicted gene, 34515 Neighboring gene STARR-positive B cell enhancer ABC_E3905 Neighboring gene predicted gene, 25657 Neighboring gene predicted gene, 17249 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC39016

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
T-complex protein 11-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146008.2NP_666120.1  T-complex protein 11-like protein 2

    See identical proteins and their annotated locations for NP_666120.1

    Status: PROVISIONAL

    Source sequence(s)
    AC140333
    Consensus CDS
    CCDS36016.1
    UniProtKB/Swiss-Prot
    Q8C2D5, Q8K1H7
    Related
    ENSMUSP00000020223.8, ENSMUST00000020223.8
    Conserved Domains (1) summary
    pfam05794
    Location:77495
    Tcp11; T-complex protein 11

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    84412811..84450219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)