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Heatr6 HEAT repeat containing 6 [ Mus musculus (house mouse) ]

Gene ID: 217026, updated on 23-Jun-2021

Summary

Official Symbol
Heatr6provided by MGI
Official Full Name
HEAT repeat containing 6provided by MGI
Primary source
MGI:MGI:1919790
See related
Ensembl:ENSMUSG00000000976
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BB135312; BB249351; 2700008B19Rik
Expression
Ubiquitous expression in CNS E14 (RPKM 7.8), whole brain E14.5 (RPKM 7.8) and 28 other tissues See more
Orthologs
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Genomic context

See Heatr6 in Genome Data Viewer
Location:
11; 11 C
Exon count:
20
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (83644463..83674580)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (83753637..83783754)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (83567139..83597256)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene WAP four-disulfide core domain 18 Neighboring gene WAP four-disulfide core domain 21 Neighboring gene COMM domain containing 9 pseudogene Neighboring gene predicted gene, 38934

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ22087

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
HEAT repeat-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145432.3NP_663407.2  HEAT repeat-containing protein 6

    See identical proteins and their annotated locations for NP_663407.2

    Status: VALIDATED

    Source sequence(s)
    AA183118, AK132494, AK138219, BC065092, DV657360
    Consensus CDS
    CCDS36259.1
    UniProtKB/Swiss-Prot
    Q6P1G0
    Related
    ENSMUSP00000001002.8, ENSMUST00000001002.8
    Conserved Domains (2) summary
    pfam13251
    Location:421602
    DUF4042; Domain of unknown function (DUF4042)
    sd00044
    Location:817846
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    83644463..83674580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017314468.2XP_017169957.1  HEAT repeat-containing protein 6 isoform X2

    Conserved Domains (2) summary
    sd00044
    Location:353382
    HEAT; HEAT repeat [structural motif]
    pfam13251
    Location:1138
    DUF4042; Domain of unknown function (DUF4042)
  2. XM_030245843.1XP_030101703.1  HEAT repeat-containing protein 6 isoform X1

    Conserved Domains (2) summary
    sd00044
    Location:467496
    HEAT; HEAT repeat [structural motif]
    pfam13251
    Location:71252
    DUF4042; Domain of unknown function (DUF4042)
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