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Tpst1 protein-tyrosine sulfotransferase 1 [ Mus musculus (house mouse) ]

Gene ID: 22021, updated on 23-Jun-2021

Summary

Official Symbol
Tpst1provided by MGI
Official Full Name
protein-tyrosine sulfotransferase 1provided by MGI
Primary source
MGI:MGI:1298231
See related
Ensembl:ENSMUSG00000034118
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tang; R75054; Tango13a
Expression
Ubiquitous expression in bladder adult (RPKM 26.6), testis adult (RPKM 22.6) and 28 other tissues See more
Orthologs
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Genomic context

See Tpst1 in Genome Data Viewer
Location:
5; 5 G1.3
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (130102167..130164575)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (130073326..130135734)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (130549196..130611602)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 40334 Neighboring gene calcitonin gene-related peptide-receptor component protein Neighboring gene uncharacterized LOC118568755 Neighboring gene potassium channel tetramerisation domain containing 7 Neighboring gene RAB guanine nucleotide exchange factor (GEF) 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit A12, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-tyrosine sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein-tyrosine sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein-tyrosine sulfotransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables protein-tyrosine sulfotransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine sulfation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in peptidyl-tyrosine sulfation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within peptidyl-tyrosine sulfation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peptidyl-tyrosine sulfation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of Golgi membrane ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein-tyrosine sulfotransferase 1
Names
TPST-1
tyrosylprotein sulfotransferase 1
NP_001123948.1
NP_038865.1
XP_006504481.1
XP_036020889.1
XP_036020890.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001130476.2NP_001123948.1  protein-tyrosine sulfotransferase 1

    See identical proteins and their annotated locations for NP_001123948.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AI183198, AK150753, CJ046784
    Consensus CDS
    CCDS39293.1
    UniProtKB/Swiss-Prot
    O70281
    UniProtKB/TrEMBL
    Q4FK50
    Related
    ENSMUSP00000035614.9, ENSMUST00000040721.9
    Conserved Domains (1) summary
    pfam13469
    Location:72261
    Sulfotransfer_3; Sulfotransferase family
  2. NM_013837.2NP_038865.1  protein-tyrosine sulfotransferase 1

    See identical proteins and their annotated locations for NP_038865.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AF038008, AI183198
    Consensus CDS
    CCDS39293.1
    UniProtKB/Swiss-Prot
    O70281
    UniProtKB/TrEMBL
    Q4FK50
    Related
    ENSMUSP00000112571.2, ENSMUST00000118993.8
    Conserved Domains (1) summary
    pfam13469
    Location:72261
    Sulfotransfer_3; Sulfotransferase family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    130102167..130164575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164996.1XP_036020889.1  protein-tyrosine sulfotransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam13469
    Location:72261
    Sulfotransfer_3; Sulfotransferase family
  2. XM_036164997.1XP_036020890.1  protein-tyrosine sulfotransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam13469
    Location:72261
    Sulfotransfer_3; Sulfotransferase family
  3. XM_006504418.3XP_006504481.1  protein-tyrosine sulfotransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam13469
    Location:72261
    Sulfotransfer_3; Sulfotransferase family
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