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gag polyprotein [ Baboon endogenous virus strain M7 ]

Gene ID: 22318532, updated on 29-Jul-2022

Summary

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Gene symbol
gag
Gene description
polyprotein
Locus tag
Q776_gp2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Baboon endogenous virus strain M7 (strain: M7)
Lineage
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus
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Genomic context

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Location:
clone: lambda BEV31
Sequence:
NC_022517.1 (985..2598)

NC_022517.1Genomic Context describing neighboring genes Neighboring gene gag-pol precursor polyprotein Neighboring gene Neighboring gene polyprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022517.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Provirus of M7 baboon endogenous virus: nucleotide sequence of the gag-pol region. Tamura TA. J Virol, 1983 Jul. PMID 6408267, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polyprotein
Names
p12 protein
p15 protein
p30 protein
p10 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_022517.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009109690.1 polyprotein [Baboon endogenous virus strain M7]

    See identical proteins and their annotated locations for YP_009109690.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P03341, P10268
    Conserved Domains (3) summary
    smart00343
    Location:502 → 518
    ZnF_C2HC; zinc finger
    pfam01140
    Location:15 → 125
    Gag_MA; Matrix protein (MA), p15
    pfam02093
    Location:236 → 443
    Gag_p30; Gag P30 core shell protein

  2. YP_009109696.1 p12 protein

    Conserved Domains (1) summary
    pfam01140
    Location:15 → 112
    Gag_MA; Matrix protein (MA), p15

  3. YP_009109697.1 p15 protein

  4. YP_009109698.1 p30 protein

    Conserved Domains (1) summary
    pfam02093
    Location:10 → 217
    Gag_p30; Gag P30 core shell protein

  5. YP_009109699.1 p10 protein

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P03341.4

Gene LinkOut

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