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Smgc submandibular gland protein C [ Mus musculus (house mouse) ]

Gene ID: 223809, updated on 8-Feb-2024

Summary

Official Symbol
Smgcprovided by MGI
Official Full Name
submandibular gland protein Cprovided by MGI
Primary source
MGI:MGI:1859618
See related
Ensembl:ENSMUSG00000047295 AllianceGenome:MGI:1859618
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Muc19; Sfc21; DXImx49e; Muc19/Smgc; 2310010P21Rik
Summary
Predicted to be located in extracellular region. Is expressed in sublingual gland; sublingual gland epithelium; and submandibular gland. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Smgc in Genome Data Viewer
Location:
15 E3; 15 46.14 cM
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (91722531..91745633)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (91838328..91861435)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E4147 Neighboring gene leucine-rich repeat kinase 2 Neighboring gene STARR-seq mESC enhancer starr_39505 Neighboring gene RAS related protein 1b pseudogene Neighboring gene STARR-seq mESC enhancer starr_39506 Neighboring gene STARR-seq mESC enhancer starr_39507 Neighboring gene mucin 19 Neighboring gene STARR-seq mESC enhancer starr_39508 Neighboring gene NADH dehydrogenase (ubiquinone) Fe-S protein 2 pseudogene Neighboring gene leucine-rich repeat LGI family, member 1 pseudogene

Genomic regions, transcripts, and products

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
submandibular gland protein C
Names
mucin 19
neonatal submandibular gland protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198927.3NP_945121.1  submandibular gland protein C precursor

    See identical proteins and their annotated locations for NP_945121.1

    Status: PROVISIONAL

    Source sequence(s)
    FQ976815
    Consensus CDS
    CCDS27762.1
    UniProtKB/Swiss-Prot
    A7UN65, Q3V1B0, Q58E46, Q6IS33, Q6JHY2, Q7TNU8, Q80ZH6
    UniProtKB/TrEMBL
    B9EHK5
    Related
    ENSMUSP00000085915.4, ENSMUST00000088555.10

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    91722531..91745633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)