Format

Send to:

Choose Destination

Krt79 keratin 79 [ Mus musculus (house mouse) ]

Gene ID: 223917, updated on 23-Jun-2021

Summary

Official Symbol
Krt79provided by MGI
Official Full Name
keratin 79provided by MGI
Primary source
MGI:MGI:2385030
See related
Ensembl:ENSMUSG00000061397
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BC031593
Expression
Biased expression in lung adult (RPKM 6.7), genital fat pad adult (RPKM 2.5) and 6 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Krt79 in Genome Data Viewer
Location:
15; 15 F2
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101837767..101848759, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101929332..101940324, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101759763..101770755, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene keratin 76 Neighboring gene keratin 4 Neighboring gene keratin 78 Neighboring gene keratin 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC36907

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
keratin, type II cytoskeletal 79
Names
CK-79
K79
cytokeratin-79
type-II keratin Kb38

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146063.1NP_666175.1  keratin, type II cytoskeletal 79

    See identical proteins and their annotated locations for NP_666175.1

    Status: PROVISIONAL

    Source sequence(s)
    BC031593
    Consensus CDS
    CCDS27867.1
    UniProtKB/Swiss-Prot
    Q8VED5
    Related
    ENSMUSP00000023799.8, ENSMUST00000023799.8
    Conserved Domains (2) summary
    pfam00038
    Location:138452
    Filament; Intermediate filament protein
    pfam16208
    Location:62135
    Keratin_2_head; Keratin type II head

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    101837767..101848759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center