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Gm94 predicted gene 94 [ Mus musculus (house mouse) ]

Gene ID: 225443, updated on 21-Apr-2024

Summary

Official Symbol
Gm94provided by MGI
Official Full Name
predicted gene 94provided by MGI
Primary source
MGI:MGI:2684940
See related
Ensembl:ENSMUSG00000071858 AllianceGenome:MGI:2684940
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be located in extracellular region. Orthologous to human C5orf46 (chromosome 5 open reading frame 46). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in stomach adult (RPKM 18.8) and lung adult (RPKM 4.4) See more
Orthologs
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Genomic context

Location:
18 B3; 18 23.49 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (43910261..43925943, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (43777196..43792878, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_44454 Neighboring gene serine peptidase inhibitor, Kazal type 1 Neighboring gene secretoglobin, family 3A, member 2 Neighboring gene STARR-seq mESC enhancer starr_44455 Neighboring gene predicted gene, 41715 Neighboring gene serine peptidase inhibitor, Kazal type 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C5orf46 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033280.2NP_001028452.1  uncharacterized protein C5orf46 homolog precursor

    See identical proteins and their annotated locations for NP_001028452.1

    Status: VALIDATED

    Source sequence(s)
    AK131907
    Consensus CDS
    CCDS37804.1
    UniProtKB/Swiss-Prot
    Q3V2D2
    UniProtKB/TrEMBL
    B2RV94, B7ZWD7
    Related
    ENSMUSP00000094321.4, ENSMUST00000096570.4
    Conserved Domains (1) summary
    pfam15144
    Location:190
    DUF4576; Domain of unknown function (DUF4576)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    43910261..43925943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)