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Tiprl TIP41, TOR signalling pathway regulator-like (S. cerevisiae) [ Mus musculus (house mouse) ]

Gene ID: 226591, updated on 16-Jul-2021

Summary

Official Symbol
Tiprlprovided by MGI
Official Full Name
TIP41, TOR signalling pathway regulator-like (S. cerevisiae)provided by MGI
Primary source
MGI:MGI:1915087
See related
Ensembl:ENSMUSG00000040843
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810011K17Rik
Expression
Ubiquitous expression in CNS E18 (RPKM 10.8), CNS E14 (RPKM 8.5) and 28 other tissues See more
Orthologs
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Genomic context

See Tiprl in Genome Data Viewer
Location:
1; 1 H2.2
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (165039855..165110228, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (165212286..165282659, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (167142417..167167089, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene T-box 19 Neighboring gene SFT2 domain containing 2 Neighboring gene G protein-coupled receptor 161 Neighboring gene DDB1 and CUL4 associated factor 6 Neighboring gene predicted gene, 24637 Neighboring gene mitochondrial pyruvate carrier 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in TOR signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in negative regulation of phosphoprotein phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of phosphoprotein phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357410.1NP_001344339.1  TIP41-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC154142
    Conserved Domains (1) summary
    pfam04176
    Location:38206
    TIP41; TIP41-like family
  2. NM_001357411.1NP_001344340.1  TIP41-like protein isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC154142
    Conserved Domains (1) summary
    pfam04176
    Location:9177
    TIP41; TIP41-like family
  3. NM_145513.4NP_663488.1  TIP41-like protein isoform 1

    See identical proteins and their annotated locations for NP_663488.1

    Status: VALIDATED

    Source sequence(s)
    AK049784, CF531065
    Consensus CDS
    CCDS15441.1
    UniProtKB/Swiss-Prot
    Q8BH58
    Related
    ENSMUSP00000037514.6, ENSMUST00000043235.8
    Conserved Domains (1) summary
    pfam04176
    Location:50218
    TIP41; TIP41-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    165039855..165110228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011238792.3XP_011237094.1  TIP41-like protein isoform X1

    See identical proteins and their annotated locations for XP_011237094.1

    Conserved Domains (1) summary
    pfam04176
    Location:9177
    TIP41; TIP41-like family

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_180963.1: Suppressed sequence

    Description
    NM_180963.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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