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Pip5kl1 phosphatidylinositol-4-phosphate 5-kinase-like 1 [ Mus musculus (house mouse) ]

Gene ID: 227733, updated on 23-Jun-2021

Summary

Official Symbol
Pip5kl1provided by MGI
Official Full Name
phosphatidylinositol-4-phosphate 5-kinase-like 1provided by MGI
Primary source
MGI:MGI:2448520
See related
Ensembl:ENSMUSG00000046854
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BC028795
Expression
Biased expression in testis adult (RPKM 5.8), cortex adult (RPKM 2.5) and 6 other tissues See more
Orthologs
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Genomic context

See Pip5kl1 in Genome Data Viewer
Location:
2; 2 B
Exon count:
12
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (32465238..32473799)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (32575226..32583787)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (32431339..32439299)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 102, member A Neighboring gene RIKEN cDNA 9430097D07 gene Neighboring gene dolichol-phosphate (beta-D) mannosyltransferase 2 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 Neighboring gene predicted gene, 52551 Neighboring gene predicted gene, 23369 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphatidylinositol phosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cell projection IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
phosphatidylinositol 4-phosphate 5-kinase-like protein 1
Names
PI(4)P 5-kinase-like protein 1
PIPKH
phosphatidylinositol phosphate kinase homolog
ptdIns(4)P-5-kinase-like protein 1
NP_001365949.1
NP_001365950.1
NP_937834.1
XP_017172887.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001379020.1NP_001365949.1  phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL928710
    Conserved Domains (1) summary
    cd17304
    Location:93435
    PIPKc_PIP5KL1; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase-like protein 1 (PIP5KL1) and similar proteins
  2. NM_001379021.1NP_001365950.1  phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL928710
    Conserved Domains (1) summary
    cd17304
    Location:1338
    PIPKc_PIP5KL1; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase-like protein 1 (PIP5KL1) and similar proteins
  3. NM_198191.3NP_937834.1  phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform 2

    See identical proteins and their annotated locations for NP_937834.1

    Status: VALIDATED

    Source sequence(s)
    AL928710, AY376879
    Consensus CDS
    CCDS15920.1
    UniProtKB/Swiss-Prot
    Q6U7H8
    Related
    ENSMUSP00000051282.8, ENSMUST00000055304.14
    Conserved Domains (1) summary
    pfam01504
    Location:129389
    PIP5K; Phosphatidylinositol-4-phosphate 5-Kinase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    32465238..32473799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017317398.3XP_017172887.1  phosphatidylinositol 4-phosphate 5-kinase-like protein 1 isoform X1

    Conserved Domains (1) summary
    cl28923
    Location:299543
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family
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