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Gpr171 G protein-coupled receptor 171 [ Mus musculus (house mouse) ]

Gene ID: 229323, updated on 23-Jun-2021

Summary

Official Symbol
Gpr171provided by MGI
Official Full Name
G protein-coupled receptor 171provided by MGI
Primary source
MGI:MGI:2442043
See related
Ensembl:ENSMUSG00000050075
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H963; A630006E05; F730001G15Rik
Expression
Biased expression in thymus adult (RPKM 4.5), spleen adult (RPKM 2.7) and 6 other tissues See more
Orthologs
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Genomic context

See Gpr171 in Genome Data Viewer
Location:
3; 3 D
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (59003869..59009242, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (59096448..59101821, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (58900370..58905743, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13, pseudogene 6 Neighboring gene predicted gene, 25572 Neighboring gene mediator complex subunit 12-like Neighboring gene RIKEN cDNA F630111L10 gene Neighboring gene purinergic receptor P2Y, G-protein coupled, 14 Neighboring gene predicted gene, 51434 Neighboring gene G protein-coupled receptor 87

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled purinergic nucleotide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
probable G-protein coupled receptor 171

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173398.3NP_775574.1  probable G-protein coupled receptor 171

    See identical proteins and their annotated locations for NP_775574.1

    Status: VALIDATED

    Source sequence(s)
    AC115919
    Consensus CDS
    CCDS17370.1
    UniProtKB/Swiss-Prot
    Q8BG55
    Related
    ENSMUSP00000082115.5, ENSMUST00000085040.5
    Conserved Domains (1) summary
    pfam00001
    Location:37285
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    59003869..59009242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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