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Gimap7 GTPase, IMAP family member 7 [ Mus musculus (house mouse) ]

Gene ID: 231932, updated on 8-Feb-2024

Summary

Official Symbol
Gimap7provided by MGI
Official Full Name
GTPase, IMAP family member 7provided by MGI
Primary source
MGI:MGI:1349657
See related
Ensembl:ENSMUSG00000043931 AllianceGenome:MGI:1349657
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
IAN7; Ian3
Summary
This gene encodes a protein belonging to the GTP-binding superfamily and to the immuno-associated nucleotide (IAN) subfamily of nucleotide-binding proteins. In humans, the IAN subfamily genes are located in a cluster at 7q36.1. [provided by RefSeq, Jul 2008]
Expression
Biased expression in spleen adult (RPKM 4.0), large intestine adult (RPKM 1.9) and 9 other tissues See more
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Genomic context

Location:
6 B2.3; 6 23.69 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (48695555..48701570)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (48718621..48724636)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene GTPase, IMAP family member 4 Neighboring gene GTPase, IMAP family member 6 Neighboring gene STARR-positive B cell enhancer ABC_E8100 Neighboring gene STARR-positive B cell enhancer ABC_E6427 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:48668564-48668753 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:48677906-48678089 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:48682931-48683193 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:48688984-48689167 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:48689235-48689400 Neighboring gene GTPase, IMAP family member 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:48696005-48696158 Neighboring gene STARR-positive B cell enhancer ABC_E10378 Neighboring gene STARR-positive B cell enhancer ABC_E1320 Neighboring gene GTPase, IMAP family member 5 Neighboring gene STARR-seq mESC enhancer starr_15794

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • MGC41480

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTP binding ISO
Inferred from Sequence Orthology
more info
 
enables GTPase activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in GTP metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in lipid droplet ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
GTPase, IMAP family member 7
Names
immune associated nucleotide 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146167.3NP_666279.1  GTPase, IMAP family member 7

    See identical proteins and their annotated locations for NP_666279.1

    Status: REVIEWED

    Source sequence(s)
    BC026200, BE448872
    Consensus CDS
    CCDS20112.1
    UniProtKB/TrEMBL
    Q8R379
    Related
    ENSMUSP00000057143.8, ENSMUST00000052503.8
    Conserved Domains (2) summary
    cd01852
    Location:9209
    AIG1; AvrRpt2-Induced Gene 1 (AIG1)
    smart00935
    Location:197288
    OmpH; Outer membrane protein (OmpH-like)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    48695555..48701570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)