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GSE1 Gse1 coiled-coil protein [ Homo sapiens (human) ]

Gene ID: 23199, updated on 3-Apr-2024

Summary

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Official Symbol
GSE1provided by HGNC
Official Full Name
Gse1 coiled-coil proteinprovided by HGNC
Primary source
HGNC:HGNC:28979
See related
Ensembl:ENSG00000131149 MIM:616886; AllianceGenome:HGNC:28979
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CRHSP24; KIAA0182
Summary
This gene encodes a proline-rich protein with coiled coil domains that may be a subunit of a BRAF35-HDAC (BHC) histone deacetylase complex. This gene may function as an oncogene in breast cancer and enhanced expression of the encoded protein has been observed in breast cancer patients. [provided by RefSeq, May 2017]
Expression
Ubiquitous expression in placenta (RPKM 7.8), fat (RPKM 7.8) and 25 other tissues See more
Orthologs
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Genomic context

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Location:
16q24.1
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (85169512..85676200)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (91235680..91741713)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (85645015..85709806)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371381 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85159272-85159794 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85159795-85160316 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85170709-85171641 Neighboring gene uncharacterized LOC105371382 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85180218-85180762 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85180763-85181307 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7800 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7801 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11264 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85187102-85187602 Neighboring gene Sharpr-MPRA regulatory region 15454 Neighboring gene long intergenic non-protein coding RNA 2139 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85204591-85205300 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85205301-85206012 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85221161-85222101 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85224026-85224526 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr16:85233339-85234538 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85234576-85235312 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85240619-85241362 Neighboring gene Sharpr-MPRA regulatory region 3131 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85248283-85248783 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85254771-85255472 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85255473-85256172 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85259454-85259616 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11265 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11266 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11267 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85261597-85262172 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85267436-85267602 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85267685-85268542 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7802 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7803 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85272407-85272982 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85274317-85275021 Neighboring gene microRNA 12128 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85292757-85293460 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85293461-85294165 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85292052-85292756 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85300159-85300706 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85303550-85304252 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85305185-85306181 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85308847-85309819 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85309820-85310793 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85310794-85311766 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85330200-85330435 Neighboring gene Sharpr-MPRA regulatory region 9478 Neighboring gene uncharacterized LOC101928502 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11270 Neighboring gene Sharpr-MPRA regulatory region 9835 Neighboring gene uncharacterized LOC107984830 Neighboring gene long intergenic non-protein coding RNA 311 Neighboring gene cytochrome c oxidase subunit 6C pseudogene 16 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7804 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85350968-85351763 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85353355-85353865 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85353866-85354375 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85355126-85355656 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85355657-85356187 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85361388-85361956 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85361957-85362524 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85364231-85364798 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85380301-85380577 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85383235-85383873 Neighboring gene microRNA 5093 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85387813-85388516 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85388517-85389218 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85389454-85389954 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85397928-85398554 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85398555-85399181 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85404333-85404558 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85406218-85406731 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85418551-85419116 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:85429961-85430526 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:85429395-85429960 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85436783-85437311 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85451929-85452546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85453670-85454511 Neighboring gene Sharpr-MPRA regulatory region 8888 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85468128-85468788 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85469448-85470107 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85470108-85470766 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85474018-85474538 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85474539-85475058 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85477805-85478693 Neighboring gene uncharacterized LOC124903738 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7806 Neighboring gene OCT4-H3K4me1 hESC enhancer GRCh37_chr16:85485239-85485738 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85485752-85486252 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85491854-85492505 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85494556-85495263 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85493849-85494555 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:85493140-85493848 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85496679-85497386 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85498095-85498800 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85507767-85508622 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85508623-85509477 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85522312-85522482 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85523747-85524594 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85524595-85525442 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85525443-85526290 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11271 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85547643-85548327 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85548328-85549011 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85549012-85549696 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85549697-85550379 Neighboring gene uncharacterized LOC124903739 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85557842-85558457 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85558458-85559072 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85559689-85560304 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85575513-85576422 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85578183-85579016 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85580527-85581027 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85583771-85584359 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85584360-85584947 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7807 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7808 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:85588705-85589205 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11272 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7809 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85590477-85591335 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85592721-85592911 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11273 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11274 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85598712-85599441 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85601775-85601970 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85600901-85601628 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11275 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11277 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85610162-85610728 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85611294-85611859 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85613556-85614120 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85616579-85617188 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85617189-85617800 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85617801-85618411 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85619023-85619633 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85618412-85619022 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85621594-85622550 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85623933-85624848 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85632946-85633646 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85634349-85635068 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85635069-85635787 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85635788-85636506 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85638229-85638872 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7810 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85644485-85645006 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85645007-85645528 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7812 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11280 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7813 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85647861-85648712 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7815 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7814 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11281 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85652369-85653040 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85653041-85653712 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85658570-85659078 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85659079-85659586 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85660095-85660601 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85660691-85661510 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85661511-85662329 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85665311-85666088 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85668961-85669914 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85672914-85673448 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85673449-85673981 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85685005-85685906 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85704698-85704871 Neighboring gene RNA, 7SL, cytoplasmic 381, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85721369-85721902 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7818 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:85722953-85723454 Neighboring gene uncharacterized LOC124903740 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7817 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85729233-85729805 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:85735359-85735574 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85738821-85739513 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85743177-85743746 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:85762391-85763258 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11282 Neighboring gene GINS complex subunit 2 Neighboring gene chromosome 16 open reading frame 74 Neighboring gene microRNA 1910

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Overexpression of GSE1 Related to Trastuzumab Resistance in Gastric Cancer Cells. Wang W, et al. Biomed Res Int, 2021. PMID 33623790, Free PMC Article
  2. GSE1 negative regulation by miR-489-5p promotes breast cancer cell proliferation and invasion. Chai P, et al. Biochem Biophys Res Commun, 2016 Feb 26. PMID 26828271
  3. GSE1 predicts poor survival outcome in gastric cancer patients by SLC7A5 enhancement of tumor growth and metastasis. Ding K, et al. J Biol Chem, 2018 Mar 16. PMID 29367342, Free PMC Article
  4. Transrepressive function of TLX requires the histone demethylase LSD1. Yokoyama A, et al. Mol Cell Biol, 2008 Jun. PMID 18391013, Free PMC Article
  5. An essential role for CoREST in nucleosomal histone 3 lysine 4 demethylation. Lee MG, et al. Nature, 2005 Sep 15. PMID 16079794

See all (77) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. GSE1 links the HDAC1/CoREST co-repressor complex to DNA damage.
    Title: GSE1 links the HDAC1/CoREST co-repressor complex to DNA damage.
  2. Overexpression of GSE1 Related to Trastuzumab Resistance in Gastric Cancer Cells.
    Title: Overexpression of GSE1 Related to Trastuzumab Resistance in Gastric Cancer Cells.
  3. High GSE1 expression is associated with gastric cancer growth and metastasis.
    Title: GSE1 predicts poor survival outcome in gastric cancer patients by SLC7A5 enhancement of tumor growth and metastasis.
  4. In this study, we reported that GSE1 is overexpression in breast cancer and silencing of GSE1 significantly suppressed breast cancer cells proliferation, migration and invasion.
    Title: GSE1 negative regulation by miR-489-5p promotes breast cancer cell proliferation and invasion.
Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Genome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • KIAA0182

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
genetic suppressor element 1
Names
CTC-786C10.1
Gse1 coiled-coil protein homolog

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_054715.1 RefSeqGene

    Range
    448811..511689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001134473.3 → NP_001127945.1  genetic suppressor element 1 isoform 2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) contains an alternate 5' terminal exon, lacks an exon in the 5' region, and initiates translation from an in-frame downstream AUG, compared to variant 1. The resulting isoform (2) has a shorter N-terminus compared to isoform 1.
    Source sequence(s)
    AC123908, BC037556, D80004, GD138010
    Consensus CDS
    CCDS45539.1
    UniProtKB/TrEMBL
    H0Y613
    Related
    ENSP00000384839.2, ENST00000405402.6
    Conserved Domains (2) summary
    pfam12540
    Location:628 → 768
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1038 → 1096
    BST2; Bone marrow stromal antigen 2

  2. NM_001278184.3 → NP_001265113.1  genetic suppressor element 1 isoform 3

    See identical proteins and their annotated locations for NP_001265113.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) lacks an in-frame exon in the 5' coding region compared to variant 1, which results in a shorter isoform (3) missing an internal protein segment compared to isoform 1.
    Source sequence(s)
    AC123908, BC037556, D80004, GD138010, HY041236
    Consensus CDS
    CCDS62007.1
    UniProtKB/TrEMBL
    H0Y613
    Related
    ENSP00000376934.1, ENST00000393243.5
    Conserved Domains (2) summary
    pfam12540
    Location:659 → 799
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1069 → 1127
    BST2; Bone marrow stromal antigen 2

  3. NM_014615.5 → NP_055430.1  genetic suppressor element 1 isoform 1

    See identical proteins and their annotated locations for NP_055430.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AC123908, BC037556, D80004, GD138010, HY041236
    Consensus CDS
    CCDS10952.1
    UniProtKB/Swiss-Prot
    D3DUM4, Q14687, Q8IY61, Q96GA4, Q9BW09
    UniProtKB/TrEMBL
    H0Y613
    Related
    ENSP00000253458.6, ENST00000253458.12
    Conserved Domains (2) summary
    pfam12540
    Location:732 → 872
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1142 → 1200
    BST2; Bone marrow stromal antigen 2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    85169512..85676200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047433837.1 → XP_047289793.1  genetic suppressor element 1 isoform X20

    Related
    ENSP00000490157.1, ENST00000637419.1

  2. XM_017023084.2 → XP_016878573.1  genetic suppressor element 1 isoform X21

  3. XM_005255859.6 → XP_005255916.3  genetic suppressor element 1 isoform X1

  4. XM_005255860.4 → XP_005255917.3  genetic suppressor element 1 isoform X2

  5. XM_005255861.6 → XP_005255918.3  genetic suppressor element 1 isoform X3

  6. XM_011522965.4 → XP_011521267.1  genetic suppressor element 1 isoform X4

    Conserved Domains (2) summary
    pfam12540
    Location:768 → 908
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1178 → 1236
    BST2; Bone marrow stromal antigen 2

  7. XM_047433828.1 → XP_047289784.1  genetic suppressor element 1 isoform X12

  8. XM_005255863.5 → XP_005255920.1  genetic suppressor element 1 isoform X7

    UniProtKB/TrEMBL
    H0Y613
    Conserved Domains (2) summary
    pfam12540
    Location:744 → 884
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1154 → 1212
    BST2; Bone marrow stromal antigen 2

  9. XM_047433831.1 → XP_047289787.1  genetic suppressor element 1 isoform X15

  10. XM_047433823.1 → XP_047289779.1  genetic suppressor element 1 isoform X10

  11. XM_047433821.1 → XP_047289777.1  genetic suppressor element 1 isoform X10

  12. XM_047433836.1 → XP_047289792.1  genetic suppressor element 1 isoform X18

  13. XM_005255864.5 → XP_005255921.1  genetic suppressor element 1 isoform X8

    UniProtKB/TrEMBL
    H0Y613
    Conserved Domains (2) summary
    pfam12540
    Location:742 → 882
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1152 → 1210
    BST2; Bone marrow stromal antigen 2

  14. XM_047433827.1 → XP_047289783.1  genetic suppressor element 1 isoform X11

  15. XM_005255865.5 → XP_005255922.1  genetic suppressor element 1 isoform X16

    UniProtKB/TrEMBL
    H0Y613
    Conserved Domains (2) summary
    pfam12540
    Location:669 → 809
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1079 → 1137
    BST2; Bone marrow stromal antigen 2

  16. XM_047433832.1 → XP_047289788.1  genetic suppressor element 1 isoform X17

  17. XM_047433820.1 → XP_047289776.1  genetic suppressor element 1 isoform X9

  18. XM_047433830.1 → XP_047289786.1  genetic suppressor element 1 isoform X14

  19. XM_047433822.1 → XP_047289778.1  genetic suppressor element 1 isoform X10

  20. XM_047433824.1 → XP_047289780.1  genetic suppressor element 1 isoform X10

  21. XM_047433833.1 → XP_047289789.1  genetic suppressor element 1 isoform X18

  22. XM_011522966.4 → XP_011521268.1  genetic suppressor element 1 isoform X10

    UniProtKB/TrEMBL
    H0Y613
    Conserved Domains (2) summary
    pfam12540
    Location:729 → 869
    DUF3736; Protein of unknown function (DUF3736)
    pfam16716
    Location:1139 → 1197
    BST2; Bone marrow stromal antigen 2

  23. XM_047433826.1 → XP_047289782.1  genetic suppressor element 1 isoform X10

  24. XM_047433829.1 → XP_047289785.1  genetic suppressor element 1 isoform X13

  25. XM_047433835.1 → XP_047289791.1  genetic suppressor element 1 isoform X19

    Related
    ENSP00000402367.1, ENST00000412692.5

  26. XM_047433834.1 → XP_047289790.1  genetic suppressor element 1 isoform X18

  27. XM_047433818.1 → XP_047289774.1  genetic suppressor element 1 isoform X5

  28. XM_047433819.1 → XP_047289775.1  genetic suppressor element 1 isoform X6

RNA

  1. XR_001751877.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    91235680..91741713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054379897.1 → XP_054235872.1  genetic suppressor element 1 isoform X20

  2. XM_047446670.1 → XP_047302626.1  genetic suppressor element 1 isoform X21

  3. XM_054379874.1 → XP_054235849.1  genetic suppressor element 1 isoform X1

  4. XM_054379875.1 → XP_054235850.1  genetic suppressor element 1 isoform X2

  5. XM_054379876.1 → XP_054235851.1  genetic suppressor element 1 isoform X3

  6. XM_054379877.1 → XP_054235852.1  genetic suppressor element 1 isoform X4

  7. XM_054379890.1 → XP_054235865.1  genetic suppressor element 1 isoform X12

  8. XM_054379880.1 → XP_054235855.1  genetic suppressor element 1 isoform X7

  9. XM_054379889.1 → XP_054235864.1  genetic suppressor element 1 isoform X15

  10. XM_054379884.1 → XP_054235859.1  genetic suppressor element 1 isoform X10

  11. XM_054379881.1 → XP_054235856.1  genetic suppressor element 1 isoform X8

  12. XM_054379886.1 → XP_054235861.1  genetic suppressor element 1 isoform X11

  13. XM_054379891.1 → XP_054235866.1  genetic suppressor element 1 isoform X16

  14. XM_054379892.1 → XP_054235867.1  genetic suppressor element 1 isoform X17

  15. XM_054379893.1 → XP_054235868.1  genetic suppressor element 1 isoform X10

  16. XM_054379882.1 → XP_054235857.1  genetic suppressor element 1 isoform X9

  17. XM_054379888.1 → XP_054235863.1  genetic suppressor element 1 isoform X14

  18. XM_054379883.1 → XP_054235858.1  genetic suppressor element 1 isoform X10

  19. XM_054379885.1 → XP_054235860.1  genetic suppressor element 1 isoform X10

  20. XM_054379894.1 → XP_054235869.1  genetic suppressor element 1 isoform X18

  21. XM_054379887.1 → XP_054235862.1  genetic suppressor element 1 isoform X13

  22. XM_054379896.1 → XP_054235871.1  genetic suppressor element 1 isoform X19

  23. XM_054379895.1 → XP_054235870.1  genetic suppressor element 1 isoform X18

  24. XM_054379878.1 → XP_054235853.1  genetic suppressor element 1 isoform X5

  25. XM_054379879.1 → XP_054235854.1  genetic suppressor element 1 isoform X6

RNA

  1. XR_007086738.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q14687.3 GenPept UniProtKB/Swiss-Prot:Q14687

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