Format

Send to:

Choose Destination

Zfp825 zinc finger protein 825 [ Mus musculus (house mouse) ]

Gene ID: 235956, updated on 23-Jun-2021

Summary

Official Symbol
Zfp825provided by MGI
Official Full Name
zinc finger protein 825provided by MGI
Primary source
MGI:MGI:2385315
See related
Ensembl:ENSMUSG00000069208
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in bladder adult (RPKM 1.2), CNS E11.5 (RPKM 1.1) and 24 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Zfp825 in Genome Data Viewer
Location:
13; 13 C1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (74626497..74642132, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (74478378..74494012, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (74617505..74631398, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41004 Neighboring gene RIKEN cDNA E430024I08 gene Neighboring gene zinc finger protein 431-like Neighboring gene upstream binding transcription factor, RNA polymerase I pseudogene Neighboring gene stomatin (Epb7.2)-like 2 pseudogene Neighboring gene zinc finger protein 431-like Neighboring gene uncharacterized LOC118568073

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374752.1NP_001361681.1  zinc finger protein 124 isoform 1

    Status: VALIDATED

    Source sequence(s)
    CT009718
    Consensus CDS
    CCDS88485.1
    Conserved Domains (3) summary
    COG5048
    Location:119271
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:207227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2262
    KRAB; KRAB box
  2. NM_001377115.1NP_001364044.1  zinc finger protein 124 isoform 1

    Status: VALIDATED

    Source sequence(s)
    CT009718
    Related
    ENSMUSP00000152719.2, ENSMUST00000221173.2
    Conserved Domains (3) summary
    COG5048
    Location:119271
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:207227
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:2262
    KRAB; KRAB box
  3. NM_146231.2NP_666343.1  zinc finger protein 124 isoform 2

    See identical proteins and their annotated locations for NP_666343.1

    Status: VALIDATED

    Source sequence(s)
    CT009718
    Consensus CDS
    CCDS79212.1
    UniProtKB/TrEMBL
    Q91VL6
    Related
    ENSMUSP00000144128.2, ENSMUST00000202645.4
    Conserved Domains (3) summary
    COG5048
    Location:101253
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:189209
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:444
    KRAB; KRAB box

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    74626497..74642132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030247254.2XP_030103114.1  zinc finger protein 124 isoform X1

    Related
    ENSMUSP00000073973.7, ENSMUST00000074369.7
    Conserved Domains (2) summary
    COG5048
    Location:69221
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:157177
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. XM_036158036.1XP_036013929.1  zinc finger protein 124 isoform X1

    Conserved Domains (2) summary
    COG5048
    Location:69221
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:157177
    ZF_C2H2; C2H2 Zn finger [structural motif]
Support Center