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Grem2 gremlin 2, DAN family BMP antagonist [ Mus musculus (house mouse) ]

Gene ID: 23893, updated on 5-Mar-2024

Summary

Official Symbol
Grem2provided by MGI
Official Full Name
gremlin 2, DAN family BMP antagonistprovided by MGI
Primary source
MGI:MGI:1344367
See related
Ensembl:ENSMUSG00000050069 AllianceGenome:MGI:1344367
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Prdc; Gremlin2
Summary
Enables BMP binding activity; heparin binding activity; and identical protein binding activity. Involved in several processes, including determination of dorsal identity; embryonic body morphogenesis; and regulation of signal transduction. Located in extracellular space. Is expressed in several structures, including chondrocranium; integument; intestine smooth muscle circular layer; lung; and neural tube. Human ortholog(s) of this gene implicated in tooth agenesis. Orthologous to human GREM2 (gremlin 2, DAN family BMP antagonist). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in ovary adult (RPKM 15.0), lung adult (RPKM 14.2) and 20 other tissues See more
Orthologs
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Genomic context

Location:
1 H3; 1 81.08 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (174661352..174749386, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (174833785..174921911, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene formin 2 Neighboring gene STARR-seq mESC enhancer starr_03094 Neighboring gene lines homolog 2 pseudogene Neighboring gene predicted gene, 51689 Neighboring gene STARR-seq mESC enhancer starr_03095 Neighboring gene STARR-seq mESC enhancer starr_03096 Neighboring gene STARR-seq mESC enhancer starr_03097 Neighboring gene STARR-seq mESC enhancer starr_03098 Neighboring gene STARR-seq mESC enhancer starr_03100 Neighboring gene regulator of G protein signaling 7 Neighboring gene predicted gene, 53483 Neighboring gene STARR-seq mESC enhancer starr_03101 Neighboring gene STARR-positive B cell enhancer ABC_E5859 Neighboring gene STARR-seq mESC enhancer starr_03102 Neighboring gene predicted gene, 36307

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables BMP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables BMP binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 
enables heparin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables identical protein binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables receptor ligand activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
gremlin-2
Names
Gremlin1
cysteine knot superfamily 1, BMP antagonist 2
gremlin 2 homolog, cysteine knot superfamily
protein related to DAN and cerberus

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001421483.1NP_001408412.1  gremlin-2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC117627
    UniProtKB/Swiss-Prot
    O88273
    UniProtKB/TrEMBL
    Q3TST1
  2. NM_001421484.1NP_001408413.1  gremlin-2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC117627
    UniProtKB/Swiss-Prot
    O88273
    UniProtKB/TrEMBL
    Q3TST1
  3. NM_001421485.1NP_001408414.1  gremlin-2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC117627
    UniProtKB/Swiss-Prot
    O88273
    UniProtKB/TrEMBL
    Q3TST1
  4. NM_001421486.1NP_001408415.1  gremlin-2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC117627
    UniProtKB/Swiss-Prot
    O88273
    UniProtKB/TrEMBL
    Q3TST1
  5. NM_011825.2NP_035955.1  gremlin-2 precursor

    See identical proteins and their annotated locations for NP_035955.1

    Status: VALIDATED

    Source sequence(s)
    AC117627
    Consensus CDS
    CCDS15545.1
    UniProtKB/Swiss-Prot
    O88273
    UniProtKB/TrEMBL
    Q3TST1
    Related
    ENSMUSP00000049640.4, ENSMUST00000055294.4
    Conserved Domains (1) summary
    pfam03045
    Location:51158
    DAN; DAN domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    174661352..174749386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)