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Ranbp6 RAN binding protein 6 [ Mus musculus (house mouse) ]

Gene ID: 240614, updated on 11-Apr-2024

Summary

Official Symbol
Ranbp6provided by MGI
Official Full Name
RAN binding protein 6provided by MGI
Primary source
MGI:MGI:2683212
See related
Ensembl:ENSMUSG00000074909 AllianceGenome:MGI:2683212
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C630001B19
Summary
Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within protein transport. Predicted to be active in cytoplasm and nucleus. Orthologous to human RANBP6 (RAN binding protein 6). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Ranbp6 in Genome Data Viewer
Location:
19 C1; 19 24.42 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (29785508..29790374, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (29808108..29812974, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45893 Neighboring gene STARR-seq mESC enhancer starr_45894 Neighboring gene melan-A Neighboring gene bromodomain containing 10 Neighboring gene STARR-positive B cell enhancer ABC_E7643 Neighboring gene STARR-seq mESC enhancer starr_45896 Neighboring gene STARR-seq mESC enhancer starr_45897 Neighboring gene predicted gene, 41832 Neighboring gene predicted gene, 36209 Neighboring gene STARR-seq mESC enhancer starr_45899 Neighboring gene interleukin 33

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ11120

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables nuclear import signal receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nuclear localization sequence binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in synapse EXP
Inferred from Experiment
more info
PubMed 
is_active_in synapse IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177721.4NP_808389.2  ran-binding protein 6

    See identical proteins and their annotated locations for NP_808389.2

    Status: VALIDATED

    Source sequence(s)
    BC056759, BC139396, BQ561129
    Consensus CDS
    CCDS37954.1
    UniProtKB/Swiss-Prot
    Q3TTJ6, Q8BIV3
    UniProtKB/TrEMBL
    A3KMD2
    Related
    ENSMUSP00000100503.3, ENSMUST00000099525.5
    Conserved Domains (3) summary
    pfam13513
    Location:380434
    HEAT_EZ; HEAT-like repeat
    pfam13646
    Location:371474
    HEAT_2; HEAT repeats
    sd00044
    Location:330353
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    29785508..29790374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)