Format

Send to:

Choose Destination

St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [ Mus musculus (house mouse) ]

Gene ID: 241230, updated on 23-Jun-2021

Summary

Official Symbol
St8sia6provided by MGI
Official Full Name
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6provided by MGI
Primary source
MGI:MGI:2386797
See related
Ensembl:ENSMUSG00000003418
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sia; Siat8f; AI314453; AI875066; ST8SiaVI; 1700007J08Rik
Expression
Biased expression in bladder adult (RPKM 5.5), genital fat pad adult (RPKM 4.9) and 10 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See St8sia6 in Genome Data Viewer
Location:
2; 2 A1
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (13659745..13798331, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (13651018..13794734, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (13576561..13715147, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 9875 Neighboring gene vimentin Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables sialyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
alpha-2,8-sialyltransferase 8F
Names
SIAT8-F
ST8Sia VI
alpha-2, 8-sialyltransferase
alpha2,8-sialyltransferase VI
sialyltransferase 8 (alpha-2, 8-sialyltransferase) F
sialyltransferase 8F
sialyltransferase St8Sia VI
sialytransferase St8Sia VI
NP_665837.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145838.1NP_665837.1  alpha-2,8-sialyltransferase 8F precursor

    See identical proteins and their annotated locations for NP_665837.1

    Status: PROVISIONAL

    Source sequence(s)
    AB059554
    Consensus CDS
    CCDS15697.1
    UniProtKB/Swiss-Prot
    Q8K4T1
    UniProtKB/TrEMBL
    Q148N5
    Related
    ENSMUSP00000003509.9, ENSMUST00000003509.10
    Conserved Domains (1) summary
    pfam00777
    Location:138391
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    13659745..13798331 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center