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Retnlg resistin like gamma [ Mus musculus (house mouse) ]

Gene ID: 245195, updated on 23-Jun-2021

Summary

Official Symbol
Retnlgprovided by MGI
Official Full Name
resistin like gammaprovided by MGI
Primary source
MGI:MGI:2667763
See related
Ensembl:ENSMUSG00000022651
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rel; Xcp; Fizz; Xcp1; Fizz3; Relmg
Expression
Biased expression in liver E18 (RPKM 61.3), subcutaneous fat pad adult (RPKM 16.4) and 3 other tissues See more
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Genomic context

See Retnlg in Genome Data Viewer
Location:
16 B5; 16 30.75 cM
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (48692971..48694861)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (48872608..48874498)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (48872721..48874611)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene resistin like beta Neighboring gene resistin like alpha Neighboring gene DAZ interacting protein 3, zinc finger Neighboring gene predicted gene, 22576 Neighboring gene cell proliferation regulating inhibitor of protein phosphatase 2A

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within myeloid dendritic cell chemotaxis IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
resistin-like gamma
Names
RELMgamma
resistin-like molecule gamma
ten-cysteine protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181596.4NP_853627.2  resistin-like gamma precursor

    See identical proteins and their annotated locations for NP_853627.2

    Status: VALIDATED

    Source sequence(s)
    AJ536019, BX631439, BY236131, DY246276
    Consensus CDS
    CCDS49865.1
    UniProtKB/Swiss-Prot
    Q8K426
    Related
    ENSMUSP00000070238.5, ENSMUST00000065666.6
    Conserved Domains (1) summary
    pfam06954
    Location:29116
    Resistin; Resistin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    48692971..48694861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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