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Amdhd2 amidohydrolase domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 245847, updated on 23-Jun-2021

Summary

Official Symbol
Amdhd2provided by MGI
Official Full Name
amidohydrolase domain containing 2provided by MGI
Primary source
MGI:MGI:2443978
See related
Ensembl:ENSMUSG00000036820
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
5730457F11Rik
Expression
Ubiquitous expression in duodenum adult (RPKM 72.5), testis adult (RPKM 49.3) and 28 other tissues See more
Orthologs
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Genomic context

See Amdhd2 in Genome Data Viewer
Location:
17; 17 A3.3
Exon count:
12
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (24374807..24382752, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (24155833..24163733, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (24292800..24300700, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerisation domain containing 5 Neighboring gene 3-phosphoinositide dependent protein kinase 1 Neighboring gene predicted gene, 33409 Neighboring gene ATPase, H+ transporting, lysosomal V0 subunit C Neighboring gene TBC1 domain family, member 24 Neighboring gene netrin 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

General protein information

Preferred Names
N-acetylglucosamine-6-phosphate deacetylase
Names
amidohydrolase domain-containing protein 2
glcNAc 6-P deacetylase
putative N-acetylglucosamine-6-phosphate deacetylase
NP_766523.2
XP_036016505.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172935.4NP_766523.2  N-acetylglucosamine-6-phosphate deacetylase

    See identical proteins and their annotated locations for NP_766523.2

    Status: PROVISIONAL

    Source sequence(s)
    CT010502
    Consensus CDS
    CCDS28475.1
    UniProtKB/Swiss-Prot
    Q8JZV7
    Related
    ENSMUSP00000036141.6, ENSMUST00000040735.12
    Conserved Domains (2) summary
    COG1228
    Location:31401
    HutI; Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism]
    cd00854
    Location:13398
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    24374807..24382752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036160612.1XP_036016505.1  N-acetylglucosamine-6-phosphate deacetylase isoform X1

    Related
    ENSMUSP00000120520.3, ENSMUST00000129523.3
    Conserved Domains (1) summary
    cd00854
    Location:13442
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...
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