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PAP_RS00400 GTPase [ Palaeococcus pacificus DY20341 ]

Gene ID: 24841214, updated on 3-Feb-2024

Summary

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Gene symbol
PAP_RS00400
Gene description
GTPase
Locus tag
PAP_RS00400
Gene type
protein coding
Organism
Palaeococcus pacificus DY20341 (strain: DY20341, culture-collection: DSM:24777, culture-collection: JCM:17873, type-material: type strain of Palaeococcus pacificus)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus
Old locus tag
PAP_00390
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Genomic context

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NZ_CP006019.1Genomic Context describing neighboring genes Neighboring gene phosphate ABC transporter ATP-binding protein Neighboring gene ABC transporter permease Neighboring gene substrate-binding domain-containing protein Neighboring gene TIGR04076 family protein Neighboring gene DUF515 domain-containing protein Neighboring gene hypothetical protein Neighboring gene CpaF family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP006019.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. Shields MJ, et al. Biochemistry, 2009 Nov 17. PMID 19824612
  2. Properties of HflX, an enigmatic protein from Escherichia coli. Dutta D, et al. J Bacteriol, 2009 Apr. PMID 19181811, Free PMC Article
  3. E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. Jain N, et al. Biochem Biophys Res Commun, 2009 Feb 6. PMID 19109926, Free PMC Article
  4. Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Vernet C, et al. Mamm Genome, 1994 Feb. PMID 8180467
  5. The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. Bassler J, et al. J Biol Chem, 2006 Aug 25. PMID 16803892

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
GTPase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP006019.1 Reference assembly

    Range
    73715..74788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_048163997.1 GTPase [Palaeococcus pacificus]

    See identical proteins and their annotated locations for WP_048163997.1

    UniProtKB/TrEMBL
    A0A075LPA0
    Conserved Domains (2) summary
    cd01859
    Location:7 → 162
    MJ1464; An uncharacterized, circularly permuted subfamily of the Ras GTPases
    TIGR03596
    Location:4 → 254
    GTPase_YlqF; ribosome biogenesis GTP-binding protein YlqF
Nucleotide Protein
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