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PAP_RS07540 CBS domain-containing protein [ Palaeococcus pacificus DY20341 ]

Gene ID: 24842642, updated on 3-Feb-2024

Summary

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Gene symbol
PAP_RS07540
Gene description
CBS domain-containing protein
Locus tag
PAP_RS07540
Gene type
protein coding
Organism
Palaeococcus pacificus DY20341 (strain: DY20341, culture-collection: DSM:24777, culture-collection: JCM:17873, type-material: type strain of Palaeococcus pacificus)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus
Old locus tag
PAP_07705
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Genomic context

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NZ_CP006019.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene methionine adenosyltransferase Neighboring gene MBL fold metallo-hydrolase Neighboring gene CRISPR-associated protein Cas4

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP006019.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequence of Hyperthermophilic Piezophilic Archaeon Palaeococcus pacificus DY20341T, Isolated from Deep-Sea Hydrothermal Sediments. Zeng X, et al. Genome Announc, 2015 Sep 17. PMID 26383653, Free PMC Article
  2. The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Ren J, et al. Proteins, 2010 May 15. PMID 20196080

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CBS domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP006019.1 Reference assembly

    Range
    1375017..1375580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_048165430.1 CBS domain-containing protein [Palaeococcus pacificus]

    See identical proteins and their annotated locations for WP_048165430.1

    UniProtKB/TrEMBL
    A0A075LT38
    Conserved Domains (3) summary
    smart00530
    Location:12 → 60
    HTH_XRE; Helix-turn-helix XRE-family like proteins
    COG3620
    Location:1 → 185
    COG3620; Predicted transcriptional regulator with C-terminal CBS domains [Transcription]
    cl15354
    Location:76 → 182
    CBS_pair; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
Nucleotide Protein
Heading Accession and Version

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