Prss2 protease, serine, 2 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Prss2provided by RGD
Official Full Name: protease, serine, 2provided by RGD
Primary source: RGD:3418
See related: Ensembl:ENSRNOG00000064731 AllianceGenome:RGD:3418
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Ptryss2
Summary: Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Involved in response to nutrient. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human PRSS3 (serine protease 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Spleen (RPKM 2153.0) and Liver (RPKM 734.3) See more
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: 4q23

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (71244964..71250043)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (70278304..70283385)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (70689737..70694816)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

activated microglia increase neurogenesis through secretion of PRSS2.
Title: Activated microglia enhance neurogenesis via trypsinogen secretion.
Nicotine impairs secretion rather than production of pancreatic trypsinogen 2.
Title: Long-term nicotine exposure causes increased concentrations of trypsinogens and amylase in pancreatic extracts in the rat.

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

d4mgh32 (e-PCR)
- UniSTS:121923

D4Wox23 (e-PCR)
- UniSTS:118097

D4Arb36 (e-PCR), detects polymorphism
- UniSTS:227696

D4Arb9 (e-PCR), detects polymorphism
- UniSTS:227701

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables calcium ion binding	ISS Inferred from Sequence or Structural Similarity more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables serine-type endopeptidase activity	IBA Inferred from Biological aspect of Ancestor more info
enables serine-type endopeptidase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in collagen catabolic process	ISS Inferred from Sequence or Structural Similarity more info
involved_in digestion	IEA Inferred from Electronic Annotation more info
involved_in proteolysis	IBA Inferred from Biological aspect of Ancestor more info
involved_in proteolysis	ISS Inferred from Sequence or Structural Similarity more info
involved_in response to nutrient	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	ISS Inferred from Sequence or Structural Similarity more info
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info
located_in extracellular space	ISS Inferred from Sequence or Structural Similarity more info

General protein information

Go to the top of the page Help

Preferred Names: anionic trypsin-2

Names: anionic trypsin II; pancreatic trypsin 2; pancreatic trypsin II; pretrypsinogen II; serine protease 2

NP_036861.1

EC 3.4.21.4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_012729.2 → NP_036861.1 anionic trypsin-2 precursor

See identical proteins and their annotated locations for NP_036861.1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000004

UniProtKB/Swiss-Prot

P00763

UniProtKB/TrEMBL

A6IF27

Related

ENSRNOP00000082459.1, ENSRNOT00000095908.1

Conserved Domains (2) summary

smart00020
Location:23 → 239

Tryp_SPc; Trypsin-like serine protease

cd00190
Location:24 → 242

Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...