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ubc15 ubiquitin-conjugating enzyme Ubc15 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539995, updated on 13-Mar-2024

Summary

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Gene symbol
ubc15
Gene description
ubiquitin-conjugating enzyme Ubc15
Primary source
PomBase:SPBC1105.09
Locus tag
SPBC1105.09
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (3522608..3524145)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative nuclear pore-associated protein Thp1-Sac3 complex subunit Neighboring gene mediator complex subunit Pmc4 Neighboring gene EMP70 family Neighboring gene RAVE complex subunit Rav1 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene histone H3 h3.3 Neighboring gene histone H4 h4.3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multiple regulation of Rad51-mediated homologous recombination by fission yeast Fbh1. Tsutsui Y, et al. PLoS Genet, 2014 Aug. PMID 25165823, Free PMC Article
  2. S. pombe Uba1-Ubc15 Structure Reveals a Novel Regulatory Mechanism of Ubiquitin E2 Activity. Lv Z, et al. Mol Cell, 2017 Feb 16. PMID 28162934, Free PMC Article
  3. A genetic screen to discover pathways affecting cohesin function in Schizosaccharomyces pombe identifies chromatin effectors. Chen Z, et al. G3 (Bethesda), 2012 Oct. PMID 23050226, Free PMC Article
  4. Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species. Beltrao P, et al. PLoS Biol, 2009 Jun 16. PMID 19547744, Free PMC Article
  5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin conjugating enzyme activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein polyubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
ubiquitin-conjugating enzyme Ubc15
NP_596465.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3522608..3524145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022384.2 → NP_596465.1  ubiquitin-conjugating enzyme Ubc15 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596465.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y818
    Conserved Domains (2) summary
    COG5078
    Location:1 → 152
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    pfam00179
    Location:10 → 152
    UQ_con; Ubiquitin-conjugating enzyme
Nucleotide Protein
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