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rpc25 DNA-directed RNA polymerase III complex subunit Rpc25 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540510, updated on 22-Jun-2021

Summary

Gene symbol
rpc25
Gene description
DNA-directed RNA polymerase III complex subunit Rpc25
Primary source
PomBase:SPBC2G5.07c
Locus tag
SPBC2G5.07c
Gene type
protein coding
RNA name
DNA-directed RNA polymerase III complex subunit Rpc25
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See rpc25 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003423.3 (2590901..2593389, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene putative transketolase Neighboring gene sulfide-quinone oxidoreductase Neighboring gene putative elongation factor 1 alpha-like protein Neighboring gene M-factor transporter Mam1 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene miscRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the rpc25 gene: The rpc25 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to RNA polymerase III activity ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of RNA polymerase III complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

Preferred Names
DNA-directed RNA polymerase III complex subunit Rpc25
NP_001342773.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2590901..2593389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001355779.1NP_001342773.1  DNA-directed RNA polymerase III complex subunit Rpc25 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG1095
    Location:1193
    RPB7; DNA-directed RNA polymerase, subunit E'/Rpb7 [Transcription]
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